LOCUS helices 887 bp DEFINITION helices 887 bp, 887 bases, 3363E1B8 checksum. ORIGIN 1 ...AAAAAAA AAAAAABBBB BB----CCCC CCCCCCCCCC ----CCCCC- 51 -----CCCCC -----CCCCC CCC--CC-CC CC----DDD- DDDDDEEEEE 101 --FFFFFFFF -------GGG GGGG----HH HHHH------ HHHHHHI-II 151 III-----II IIIIJJ---K KKKK------ -------LLL LLLLLLLLL- 201 ---------- --------LL LL-------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- LL----LLLL --LL----LL LLLLLL---- 351 -----LLLLL LLL----LLL L----LL--- LL-------- ---------- 401 ---------- ----LLLL-- ---------- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -LL-LLLLLL --L--L---L 601 L--------K KKKK---JJG GGGGGGEEEE E---MMMM-- ----NNNNNN 651 NNN------- ---------- ----OOOO-- ---FFFFFFF FOOOO----- 701 ---------- ---------- ---------- ---------- --------NN 751 NNNN-NNN-- -------MMM M--------- ---BBBBBB- ---------- 801 ---------- ---------- ---------- ---------- ---------- 851 ------DDDD DDDD---AA- AAAAAAAAAA A...... // LOCUS helices 887 bp DEFINITION helices 887 bp, 887 bases, 6293E3A0 checksum. ORIGIN 1 ...<-----P i---->----<--- ------Piii -------->- 51 Liii-<---- ------Piii ---------- ->----<--P iv--> 101 --<-Pvi--> -------<-P vii>-----Lviii <-Pi 151 x->-Lix-<- Pix>Px---< Pxi>---CRi i------<-- -Pxii--->- 201 ---------- --------xi ia-------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- <--------- PXiib----- ----->---L 351 xii--<---- -------Pxi ib-------- ->-------- ---------- 401 ---------- ----xiia-- ---------- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -<-------P xii------- 601 >-CRiii--< Pxi>---Px< -Pvii>----- ----<--Pxv 651 i->------- ---------- ----xvii-- ---<--Pvi- >xvii----- 701 ---------- ---------- ---------- ---------- --------<- 751 -Pxvi-->-- --ACCN-----CRiv- ---<-Pii>< ---------- 801 --Pxix---- ---------- ->-Lxix<-- -----Pxix- -------->- 851 -CRv--<-Pi v-->---<-- ---Pi----- >...... // LOCUS pairing_mask 887 bp DEFINITION pairing_mask 887 bp, 887 bases, B8AFADA4 checksum. ORIGIN 1 ...((((((( (((((((((( ((----(((( (((((((((( ----(((((- 51 -----))))) -----))))) )))--))-)) ))----{{{- {{{{{((((( 101 --[[[[[[[[ -------((( ((((----(( ((((------ ))))))(-(( 151 (((-----)) ))))((---( ((((------ -------((( (((((((((- 201 ---------- --------(( ((-((-(((( ((((---))) )))))))--( 251 (((((((((( -((((((((( ---))))))) ))--(((-(( ((((---))) 301 )))--)))-) )))))))))) ((----(((( --((----(( ((((((---- 351 -----))))) )))------) )--))))--- ))----(((( ((((------ 401 -----))))) )))-))))-- ---------( (((((((((( (---(((((( 451 -------))) )))--((((- -((((((((- -((((((--- )))))))))) 501 )-)))-(((( (((((((((( ----)))))) )----))))) )))))))))) 551 ))))))))-- ----((((-- ---))))--- -))-)))))) --)--)---) 601 )--------) ))))---))) )))))))))) )---((((-- ----(((((( 651 (((--((((( ----)))))- ----((((-- ---]]]]]]] ]))))---(( 701 (((((((((- ---))))))) ))))(((((( (------))) ))))----)) 751 ))))-)))-- -------))) )--------- ---))))))( (((((((-(( 801 ((---))))- (((((((-(( ((-----))) )--))))))) -))))))))- 851 ------}}}} }}}}---))- )))))))))) )...... // LOCUS A.ambivalens 887 bp DEFINITION A.ambivalens 887 bp, 887 bases, 874F66BA checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu cccgccUC-C 101 -AGAUCA--- ------AGG- -GAA----GU CCC--GCGA- -GGGACA-AG 151 GG-UAGUA-C CCUUGGCAAC UGC-ACAGAA AACU-UACCC CUAAAUAU-U 201 CAAU--GAGG AU-UUGAU-- UCG------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --AC--UC-- --UU----AC CUUG-----G 351 CGA----CAA GGU------A A----GA--- -----U---- ---------- 401 ---------- ---AGA--UG AAGAGA---- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --A-UAUUUA --G--G---G 601 GUUGAAAC-- GCAG--UCCU UC--CCG-GA GCAAGU--A- ----GGGGGG 651 UC-------- ---------- --AAUGAGAA ------UGAU CUGAA----- 701 ---------- ---------- ---------- ---------- ---------G 751 ACCU-CCC-- ----UUG--A CGCAUAGUCG AAUCCCCCA- ---------- 801 ---------- ---------- ----AA---- ---------- ---------U 851 acagaagcgg gcuua..... .......... ....... // LOCUS A.brierleyi 887 bp DEFINITION A.brierleyi 887 bp, 887 bases, D67F245D checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu cccgccUC-C 101 -UGGCCU--- ------AAA- -GGA----GU CUC--UAUA- -GAGACA-AG 151 GG-CAACA-C CCUUGGCAAC UAU-ACAGAA ACAAGUACCU UGAAAGCU-- 201 ACAU---GUG AAAAUGAU-- UGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GCCCCU-- --UC----CU CUG------G 351 UAA-----CG GAG------G A----AG--- ----AA---- ---------- 401 ---------- ---ACA--UG AGAGU----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --A-GCUUUC --A--A---G 601 GAUGAAAAG- AUAG--ACCU CC--UAG-GA GCAAGU--A- ----GAGGGA 651 AA-------- ---------- -GAU-GAGAC U-----AGGC CCGA------ 701 ---------- ---------- ---------- ---------- ---------U 751 UUCC-CUC-- ---UAGG--A CGCAUAGCCA AAUCCCCCA- ---------- 801 ---------- ---------- --ACCAU--- ---------- ---------U 851 acaaaagcgg gcuua..... .......... ....... // LOCUS S.shibatae 887 bp DEFINITION S.shibatae 887 bp, 887 bases, 7BA83E41 checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu ccagccUC-C 101 -AACCCUU-- ------ACA- -AGA----AC CCC--GUAA- -GGGGUA-GG 151 GA-UAGAA-U CCCUGGCUAC UAC-ACAGAA ACGA--AGCC CUAAUACU-- 201 AGAUA-GAUG AU-------- UGG------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --AC--CU-- --AC----UA GCAA-----G 351 UAA----UUG CUA------G U----AG--- -----U---- ---------- 401 ---------- ---ACG--AU AAUGAUGAA- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --A-GUAUUA --G--G---G 601 CUUGAAACG- GUAG--ACCU CU--UGG-GA GCAAGU--UG A---AGGGGG 651 ---------- ---------- --AU-GAGCA -----AAGGG UUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 -CUC-CUU-- --AUAGU--A CGCUUAGUCG AAUCCCCUC- ---------- 801 ---------- ---------- ----AG---- ---------- ---------U 851 acaaaagcug gcuua..... .......... ....... // LOCUS S.solfataricus 887 bp DEFINITION S.solfataricus 887 bp, 887 bases, A7318BC7 checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaacu gcagccUC-C 101 -AACCCUU-- ------ACA- -AGA----AC CCC--GUAA- -GGGGUA-GG 151 GA-UAGAA-U CCCUGGCUAC UAC-ACAGAA ACGA--AGCC CUAAUACU-- 201 AGAUA-GAUG AU-------- UGG------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --AC--CU-- --AC----UA GCAA-----G 351 UAA----UUG CUA------G U----AG--- -----U---- ---------- 401 ---------- ---ACA--UG AUAGAUGAA- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --A-GUAUUA --G--G---A 601 CUUGAAACG- GUAG--ACCU CU--UGG-GA GCAAGU--UG A---AGGGGG 651 ---------- ---------- --AU-GAGCA -----AAGGG UUAG------ 701 ---------- ---------- ---------- ---------- ---------- 751 -CUC-CAU-- ---AUGU--A CGCUUAGUCG AAUCCCCUC- ---------- 801 ---------- ---------- ----AG---- ---------- ---------U 851 acaaaagcug gcuua..... .......... ....... // LOCUS S.solfataricus-P2 887 bp DEFINITION S.solfataricus-P2 887 bp, 887 bases, AC3D5CBB checksum. ORIGIN 1 ..UAUGGGAU CCCUAGCGGG GGUAA-CGGG G--------- ---------- 51 CAAA------ ---------- ------C-CC UGAGGAAACU CCGGCCUC-C 101 -AACCCUU-- ------ACA- -AGA----AC CCC--GUAA- -GGGGUA-GG 151 GA-UAGAA-U CCCUGGCUAC UAC-ACAGAA ACGA--AGCC CUAAUACU-- 201 AGAUA-GAUG AU-------- UGG------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --AC--CU-- --AC----UA GCAA-----G 351 UAA----UUG CUA------G U----AG--- -----U---- ---------- 401 ---------- ---ACA--UG AUAGAUGAA- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --A-GUAUUA --G--G---G 601 CUUGAAACG- GUAG--ACCU CU--UGG-GA GCAAGU--UG A---AGGGGG 651 ---------- ---------- --AU-GAGCA -----AAGGG UUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 -CUC-CUU-- --AUAGU--A CGCUUAGUCG AAUCCCCUC- ---------- 801 ---------- ---------- ----AG---- ---------- ---------U 851 ACAGAAGCCG GGUUAUGCU- AGGGAUCCCU A...... // LOCUS S.acidocaldarius 887 bp DEFINITION S.acidocaldarius 887 bp, 887 bases, DF0808B9 checksum. ORIGIN 1 ..UAGGGGAG CCUAACAGGG GGUUA-CGGG A--------- ---------- 51 -AUA------ ---------- ------U-CC UGAGGAAACU CCAGCCUC-C 101 -AAGCCUC-- ------AUG- -GGA----GC AGU--UAGA- -UCUGCA-GG 151 GU-UAGU--G CUCUGGCUAC UGC-ACAGAA ACGU-AACCG GUAUAAUA-- 201 GGAU---AUG AAAAUGAG-- UUU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --A---UA-- --UG----UA GUCUAG---G 351 UAA--CUAGG CUA------C A----UA--- ---------- ---------- 401 ---------- ----AA--UG AGACC----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --U-AUUAUA --C--C---G 601 GCUGAAACG- GCAG--UCCU CC--CAG-GA GCAAGU--A- ----AGGAGG 651 G--------- ---------- -GAU-GAGUU -----GAGGU UCAA------ 701 ---------- ---------- ---------- ---------- ---------- 751 CCCU-CCU-- ---AAGG--A CGCUUAGUAG AAUCCCCCU- ---------- 801 ---------- ---------- ---AAA---- ---------- ---------U 851 ACAAAAGCUG GGUUAUUGU- UAGGCUCCCC UUAU... // LOCUS M.sedula 887 bp DEFINITION M.sedula 887 bp, 887 bases, F2B20632 checksum. ORIGIN 1 ..uaggggag ccuaacaggG GGCCA-CGG- ---------- ---------- 51 GAAA------ ---------- ---------C UGGGGAAACU CCAGCCUC-U 101 -CGCCC---- ------AGGG -GGA----GU CCC--GCGA- -GGGACG-GG 151 GU-UAGGU-G CUCCGACAAC UGC-ACAGAA ACGA-GACCU GCGGUGGG-- 201 -CCA--GAUG AAAAUGAU-- CAU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --UUACCC-- --CA----UC UG-------G 351 CGA------C GGA------U G----GG--- ---AGG---- ---------- 401 ---------- ---GUG--U- -GAGAGA--- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --C-CUAUCG --U--G---G 601 GUUGAAACG- GCAG--AUCU CCC-CUU-GA GCAAGU--A- ----GGGGAG 651 ---------- ---------- ------GAUA ------GGGC AAA------- 701 ---------- ---------- ---------- ---------- ----AUGA-- 751 -CUC-CCC-- ---UGAU--A CGCAGAGCCU AAUCCCCCA- ---------- 801 ---------- ---------- ----AG---- ---------- ---------U 851 ACAGAAGCUG gguuauugu- uaggcucccc u...... // LOCUS A.pernix 887 bp DEFINITION A.pernix 887 bp, 887 bases, 9A1FDD78 checksum. ORIGIN 1 ...GGCGGCG CCGGCCGGCG GCCCA-CGGC CCCCC----- ---------A 51 GCCA------ ---------- GGG--GG-GC UGAGGAAACU CCGCCCUC-C 101 -CCGCGGC-- ------GGC- -CGG----GC CCC--GCAA- -GGGGCA-CG 151 GGUGA-A-AC CCGUGGCAAC GGC-ACAGAA ACGA-CACGG CCCCGGGG-- 201 -CGU--GUCG AGGAC---GC GGC------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --UAGGCC-- --GC----CC UG-------G 351 CAA------C AGG------G C----GGCA- --GCAA---- ---------- 401 ---------- ---ACCGCAG AGGAA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --C-CCCGGG --G--A-UGC 601 GGUGAAACG- GCCG--CCCC CG--GCG-GA GCAAGG---- ----CCCCCG 651 GGC------- ---------- -GG-UGAGG- -----GCCGC GCGAA----- 701 ---------- ---------- ---------- ---------- --------GC 751 CCGG-GGG-- ---GAGA--C CGCUUAGCCC AAUGCCGCC- ---------- 801 ---------- ---------- ---GAAG--- ---------- ---------U 851 ACAGAAGGCG GGUUAU-GG- CCGGCGCCGC C...... // LOCUS P.abyssi 887 bp DEFINITION P.abyssi 887 bp, 887 bases, 89E3202A checksum. ORIGIN 1 ..UAGGCGAG GGGGCUGGGG GCUGU-CGGG C--------- ---------- 51 UCGU------ ---------- ------A-CC CGAGGAAGUU CCGCCCAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GCAA- -GGCACC-UC 151 CC-GAGA--G GGAGGGCAAC GGC-ACAGAA ACGA-CACGU CCCUCGGGG- 201 -GAU--GUGG AUGAAA--GC GGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --CU----CC CG-------G 351 CGA------C GGG------A G----CCGAG --CUAA---- ---------- 401 ---------- ---CCCGCAG ACAA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UC-CCGAGG --G--G-AUC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA GUUAGGGCC- 651 ---------- ---------- -GAU-GAGUU ----CCCGGU GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CCC-- -GUGGUAGGC CGCUUAGUCG AAUGCCCCC- ---------- 801 ---------- ---------- ---GUAG--- ---------- ---------U 851 ACAGAAGGCg gGCUAU-AG- CCCCCUCGCC UA..... // LOCUS P.horikoshi 887 bp DEFINITION P.horikoshi 887 bp, 887 bases, 532BAE4E checksum. ORIGIN 1 ..UAGGCGAG GGGGCUGGGG GCCCU-CGGG G--------- ---------- 51 -UGC------ ---------- ------U-CC CGAGGAAGUU CCGCCCAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GCAA- -GGCACC-UC 151 CC-GAGA--G GGAGGGCAAC GGC-ACAGAA ACGA-CACGC CCCUCGGGG- 201 -GAU--GUGG AUGAAA--GC GGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --CU----CC UG-------G 351 UGA------C GGG------G G----CCGAG --UUAA---- ---------- 401 ---------- ---CCCGCAG ACGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UC-CCGAGG --G--G-AUC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA GUUAGGGCC- 651 ---------- ---------- -GAU-GAGUU ----CCCGGU GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CCC-- -GUGGUAGGC CGCUUAGUCG AAUGCCCCC- ---------- 801 ---------- ---------- ---GUAG--- ---------- ---------U 851 ACAGAAGGCG GGCUAU-AG- CCCCCUCGCC UA..... // LOCUS P.furiosus 887 bp DEFINITION P.furiosus 887 bp, 887 bases, F95028E6 checksum. ORIGIN 1 ..uaggcgag ggggcugggg GCUGC-CGGG C--------- ---------U 51 UUAU------ ---------- ------G-CC CGAGGAAGUU CCGCCCAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GUAA- -GGCACC-UC 151 CC-GAGA--G GGAGGGCAAC GGC-GCAGAA ACGA-CACGU CCUCCGAGG- 201 -GAU--GGGA AUGAAA--GC GGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --GG----GC UG-------G 351 UGA------C AGC------U C----CCGAG --CUAA---- ---------- 401 ---------- ---CCCGCAG ACGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CC-UCGGGG --G--G-AUC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA AAGAGGGAC- 651 ---------- ---------- -GAU-GAGUU ----CCCGGU GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GU-CCC-- -GUGGUUGGC CGCUUAGUCG AAUGCUCCC- ---------- 801 ---------- ---------- ---UUAA--- ---------- ---------U 851 ACAGAAGGCG GGcuau-ag- cccccucgcc ua..... // LOCUS P.furiosus-2 887 bp DEFINITION P.furiosus-2 887 bp, 887 bases, A4151373 checksum. ORIGIN 1 ..UAGGCGAG GGGGCUGGGG GCUGU-CGGG C--------- ---------- 51 UCGU------ ---------- ------G-CC CGAGGAAGUU CCGCCCAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GUAA- -GGCACC-GG 151 CC-GAGA--G GCCGGGCAAC GGC-ACAGAA ACGA-CACGU CCCUCGGGG- 201 -GAU--GUGG AUGAAA--GC GGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --CU----CC CG-------G 351 UGA------C GGG------A G----CCGAG --UUAA---- ---------- 401 ---------- ---CCCGCAG ACAA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UC-CCGAGG --G--G-AGC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA GUUAGGGCC- 651 ---------- ---------- -GAU-GAGUU ----CCCGGU GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CCC-- -GUGGUAGGC CGCUUAGUCG AAUGCUCCC- ---------- 801 ---------- ---------- ---GUAG--- ---------- ---------U 851 ACAGAAGGCg gGCUAU-AG- CCCCCUCGCC UA..... // LOCUS T.celerAL1-2 887 bp DEFINITION T.celerAL1-2 887 bp, 887 bases, 7981B609 checksum. ORIGIN 1 ..uaggcgag ggggcugggg GCUGU-CGGG C--------- ---------- 51 UCGU------ ---------- ------A-CC CGAGGAAGUU CCGCCCAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GCAA- -GGCACC-UC 151 CC-GAGA--G GGAGGGCAAC GGC-ACAGAA ACGA-CACGU CCCUCGGGG- 201 -GAU--GUGG AUGAAA--GC GGA------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --CU----CC UG-------G 351 CGA------C AGG------A G----CCGAG --CUAA---- ---------- 401 ---------- ---CCCGCAG ACAA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UC-CCGAGG --G--G-AGC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA GUUAGGGCC- 651 ---------- ---------- -AAU-GAGUU ----CCCGGU GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CCC-- -GUGGUAGGC CGCUUAGUCG AAUGCCCCC- ---------- 801 ---------- ---------- --GCAGG--- ---------- ---------U 851 ACAGAAGGCG GGcuau-ag- cccccucgcc ua..... // LOCUS T.celerAL1 887 bp DEFINITION T.celerAL1 887 bp, 887 bases, 88869802 checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu ccagccAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GCAA- -GGCACC-UC 151 CC-GAGA--G GGAGGGCAAC GGC-GCAGAA ACGA-CACGU CCCGGCGGA- 201 -UAU--GGGG AUGAAA--GC GGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --GCC---CC G--------G 351 CGA------- CGG-----UG C----CCGAG --AUAA---- ---------- 401 ---------- ---CCCGCAG ACGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CC-CGUCGG --G--G-ACC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA GGAAGGGGC- 651 ---------- ---------- -GAU-GAGUU ----CCCGGU GGGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GU-CCC-- -GUGUUAGGC CGCUCAGUCG AAUGUCCCC- ---------- 801 ---------- ---------- ---UUGA--- ---------- ---------U 851 acagaagggg gcuua..... .......... ....... // LOCUS T.littoralis 887 bp DEFINITION T.littoralis 887 bp, 887 bases, 524122EE checksum. ORIGIN 1 ..uaggcgag ggggcugggg GCCCU-CGGG U--------- ---------A 51 UUUG------ ---------- ------A-CC CGAGGAAGUU CCGCCCAC-C 101 -GCACCGGG- ------GCC- -GCG----GU GCC--GCAA- -GGCACC-UC 151 CC-GGAA--G GGAGGGCAAC GGC-GCAGAA ACGA-CACGU CCCUCGGGA- 201 -AAU--GUGG AUGAAA--GC GGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GG-- --CU----CC CG-------G 351 CGA------C GGG------A G----CUGAG --UUAA---- ---------- 401 ---------- ---CCCGCAG ACAA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UC-CCGAGG --G--G-AGC 601 GGUGAAACG- GCCG--UCCC GC--GGG-GU GCAAGGCCGA GAUAGGGGC- 651 ---------- ---------- -UAU-GAGUU ----CCCGGU GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GC-CCC-- -GUGGUAGGC CGCUCAGUCG AAUGCCCCA- ---------- 801 ---------- ---------- ---UUAA--- ---------- ---------U 851 ACAGAAGGCG GGcuau-ag- cccccucgcc ua..... // LOCUS M.thermoautotrophicum-DH 887 bp DEFINITION M.thermoautotrophicum-DH , 887 bases, 18783DA7 checksum. ORIGIN 1 ........ag ccgaagggca GCUGA-CGGU CCC------- ---------- 51 UCAA------ ---------- --G--GG-GC UGAGGAAACU CCACCCAU-C 101 -AUACAG--- -----AACC- -GUG----GU GCC--GUGA- -GGCAUC-AG 151 CU-GAGA--G GCUGGACCCU GGA-GCAGAA ACGA-CACGU CUCCUGAUG- 201 -GAU--GAUA AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GC-- --UU----C- ------ACCC 351 UCAA------ --G------G A----GC--- ---------- ---------- 401 ---------- --------AG ACUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-CCAGGA --G--G-ACC 601 GGUGAAACG- GCCA--UUCC AC--GGG-AU GCAAGGACAA AUG-CUGCC- 651 ---------- ---------- -GGU-GAUUA ------CUGU AGGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CAG-- --AGGUAGUC CGCCCAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ----GA---- ---------- ---------A 851 ACAGAAGGUG GGUUA--cuc ucggca.... ....... // LOCUS M.thermoautotrophicumDH-2 887 bp DEFINITION M.thermoautotrophicumDH-2 , 887 bases, 98FC4026 checksum. ORIGIN 1 ........ag ccgaagggcA GCUGA-CGGU CCC------- ---------- 51 UCAA------ ---------- --G--GG-GC UGAGGAAACU CCACCCAU-C 101 -AUACAG--- -----AACC- -GUG----GU GCC--GUGA- -GGCAUC-AG 151 CU-GAGA--G GCUGGACCCU GGA-GCAAAA ACGA-CACGU UUCCUGAUG- 201 -GAU--GAUA AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GC-- --UU----C- ------ACCC 351 UCAA------ --G------G A----GC--- ---------- ---------- 401 ---------- --------AG ACUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-UCAGGA --G--G-ACC 601 GGUGAAACG- GUCA--UUCC AC--GGG-AU GCAAGGACAA AUG-CUGCC- 651 ---------- ---------- -GGU-GAUUA ------CUGU AGGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-UAG-- --AGGUAGUU CGCCCAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ----GA---- ---------- ---------A 851 ACAGAAGGUG GGUUA--cuc ucggca.... ....... // LOCUS M.thermoautotrophicumDH-g 887 bp DEFINITION M.thermoautotrophicumDH-g , 887 bases, A7EB770 checksum. ORIGIN 1 ........AG CCGAAGGGCA GCUGA-CGGU CCC------- ---------- 51 UCAA------ ---------- --G--GG-GC UGAGGAAACU CCACCCAU-C 101 -AUACAG--- -----AACC- -GUG----GU GCC--GUGA- -GGCAUC-AG 151 CU-GAGA--G GCUGGACCCU GGA-GCAGAA ACGA-CACGU CUCCUGAUG- 201 -GAU--GAUA AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GC-- --UU----C- ------ACCC 351 UCAA------ --G------G A----GC--- ---------- ---------- 401 ---------- --------AG ACUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-UCAGGA --G--G-ACC 601 GGUGAAACG- GCCA--UUCC AC--GGG-AU GCAAGGACAA AUG-CUGCC- 651 ---------- ---------- -GGU-GAUUA ------CUGU AGGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CAG-- --AGGUAGUC CGCCCAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ----GA---- ---------- ---------A 851 ACAGAAGGUG GGUUA--CUC UCGGCA.... ....... // LOCUS M.thermoautotrphicumMarb 887 bp DEFINITION M.thermoautotrphicumMarb , 887 bases, A42511C7 checksum. ORIGIN 1 ........aa ccgaagggca GCUGA-CGGC CCA------- ---------- 51 UUUU------ ---------- --U--GG-GC UGAGGAAACU CCACCCAU-C 101 -AUACAG--- -----AACC- -GCG----GU GCC--GUGA- -GGCAUC-AG 151 CU-GAGA--G GCUGGACCCU GGA-GCAGAA ACGA-CACGU CUUCUGGUG- 201 -GAU--GAUA AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GC-- --UU----C- ------ACCC 351 UUAAA----- --G------G A----GC--- ---------- ---------- 401 ---------- --------AG ACUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-CCAGGA --G--G-ACC 601 GGUGAAACG- GCCA--UUCC GC--GGG-AU GCAAGGACAA AUA-CUGCC- 651 ---------- ---------- -UGU-GAUUA ------CUGU AGGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CAG-- --AGGUAGUC CGCCGAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ----GA---- ---------- ---------A 851 ACAGAAGGUG GGUUA--cuc ucggca.... ....... // LOCUS M.formicicum 887 bp DEFINITION M.formicicum 887 bp, 887 bases, 8648E484 checksum. ORIGIN 1 ........ag ccgaagggca GCUAC-CGGU UUCUAUAGAU ---------U 51 UAAU------ -----GUCUG UAGUUAA-AC UGAGGAAACU CCACCCAU-C 101 -GUACAG--- -----AACC- -GUG----AU GUC--CUAA- -GACAUC-UG 151 CU-GAGA--A GCAGGACUCU GGA-GCAGAA ACGA-CACGU CUUCUGGUG- 201 -GAU--GAAC AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GA-- ---------- ---------U 351 CCG------- ---------- -----UC--- ---------- ---------- 401 ---------- --------UG AUUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-CCAGGA --G--G-AAC 601 GGUGAAACG- GCCA--AUCC AC--GGG-AU GCAAGGGUAA ACA-CUGCC- 651 ---------- ---------- -AGU-GAAUC ------CUGU AUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CAG-- --AGGUAACU CGCAUAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ---ACC---- ---------- ---------A 851 ACAGAAGGUG GGUUA--cuc ucggca.... ....... // LOCUS M.fervidus 887 bp DEFINITION M.fervidus 887 bp, 887 bases, 3294B50D checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu ccagccAU-C 101 -A-------- CCCUAAACC- -CCG----GU GCC--GCAA- -GGCAUC-GG 151 CC-GAGA--G GCCGGACCCU GGC-GCAGAA ACGA-CACGU CUCCCGAUG- 201 -GAU--GAUA AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAG-GC-- --CC----C- -------AAU 351 UAAA------ --G------G G----GU--- ---------- ---------- 401 ---------- --------UG AUUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-UCGGGA --G--G-AUC 601 GGUGAAACG- GCCA--AUCC GG--GGG-AU GCAAGGGUGA AAA-UCUGCC 651 ---------- ---------- --AA---UGA -------UAU GA-------- 701 ---------- ---------- ---------- ---------- ---------- 751 -GGC-AGA-- ---GAUUGCC CGCUUAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ----UA---- ---------- ---------A 851 acagaaggug gcuua..... .......... ....... // LOCUS ERH 887 bp DEFINITION ERH 887 bp, 887 bases, 39E662B6 checksum. ORIGIN 1 ........ag ccgaagggca GCUAC-CGGU UUCUAUAGAU ---------U 51 UAAU------ -----GUCUG UAGUUAA-AC UGAGGAAACU CCACCCAU-C 101 -GUACAG--- -----AACC- -GUG----AU GUC---UAA- -GACAUC-UG 151 CU-GAGA--G GCAGGACUCU GGA-GCAGAA ACGA-CACGU CUUCUGGUG- 201 -GAU--GAAC AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GA-- ---------- ---------U 351 CCGU------ ---------- -----UC--- ---------- ---------- 401 ---------- --------UG AUUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-CCAGGA --G--G-AAC 601 GGUGAAACG- GCCA--AUCC AC--GGG-AU GCAAGGGUAA ACA-CUGCC- 651 ---------- ---------- -AGU-GAAUC ------CUGU AUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CAG-- --AGGUAACU CGCAUAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ---ACC---- ---------- ---------A 851 ACAGAAGGUG GGUUA--cuc ucggca.... ....... // LOCUS ERE 887 bp DEFINITION ERE 887 bp, 887 bases, 2DB87B02 checksum. ORIGIN 1 ........ag ccgaagggca GCUAC-CGGU UUCUAUAGAU ---------U 51 UAAU------ -----GUCUG UAGUUAA-AC UGAGGAAACU CCACCCAU-C 101 -AUGCAG--- -----AGCC- -GUG----GU GC---CGUA- --GCAUC-AG 151 CU-GAGA--G GCUGGACCCU GGA-GCAGAA ACGA-CACGU CUCCUGGUG- 201 -GAU--GAUA AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAA-GC-- --UU----C- ------ACCC 351 UCAA------ --G------G A----GC--- ---------- ---------- 401 ---------- --------AG ACUGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-UCAGGA --G--G-ACC 601 GGUGAAACG- GCCA--UUCC AC--GGG-AU GCAAGGACAA AUG-CUGCC- 651 ---------- ---------- -UGU-GAUUA ------CUGU AGGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-CAG-- --AGGUAGUC CGCCCAGAUG AAUGCUGCC- ---------- 801 ---------- ---------- ----G----- ---------- ---------A 851 ACAGAAGGUG GGUUA--cuc ucggca.... ....... // LOCUS T.acidophilum 887 bp DEFINITION T.acidophilum 887 bp, 887 bases, 4FD9962B checksum. ORIGIN 1 GGCGGGAAAG CGCGAGGGCA GCUGA-CGCC ---------- ---------C 51 UUGA------ ---------- --------GG UGAGGAAAGU CCCCCCUC-C 101 -UCGGCGG-- ------UAU- -CCG----GC UGGC-GCAA- GCCAGCA-UC 151 CU-GAGA--G GGAUGGUAAA GGC-AAAAGA AAUA-AACGG UCUCCGG--- 201 UAAAGC---- ---------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --AUG-AU-- --UC----C- ---------- 351 GAA------- --G------G G----AU--- ---------- ---------- 401 ---------- --------GA CGUUU----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- ----CCGGAG --GAUC---C 601 GAUGGAAA-- GCCU--CCCC GG--AUG-GA GAAAGUCUAA ACG-GAUCC- 651 ---------- ---------- --UG-UGAGG -----CCGCC GUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-AUC-- --GGGUAAGA CGAACAGUCG AAUGCUGCCA GCCC------ 801 ---------- ---------- ---AUU---- ---------- ----GGGUGA 851 ACAGAAGGGG GCUUA--CUC CGCGGAUUCC CGCCA.. // LOCUS T.volcanum 887 bp DEFINITION T.volcanum 887 bp, 887 bases, 48760656 checksum. ORIGIN 1 GAUGAGAAAG CACGAGGGCA ACUGA-CGCC ---------- ---------- 51 GUAA------ ---------- --------GG UGAGGAAAGU CCCCCCUC-C 101 -UCGGCAG-- ------GGC- -CCA----GU UGGC-GCAA- GCCAGUG-UU 151 CC-GAGA--G GAAUGGUAAA GGC-AAAAGA AAUC-AACGG UUCCCAG--- 201 UAAAGG---- ---------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --AUG-AA-- --CU----C- ---------- 351 GAA------- --G------G G----GA--- ---------- ---------- 401 ---------- --------GA CGUUU----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- ----CUGGGA --GAUC---C 601 GAUGGGAA-- GCCU--UCCU GG--GUG-GA GAAAGUCUAA AAU-GGCCC- 651 ---------- ---------- --UG-UGAAG -----CUGCC GUUA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --GG-GCC-- --GGGUGAGA CGACUAGUCG AAUGUUGCCA GCCC------ 801 ---------- ---------- ---GAAA--- ---------- ----GGGUGA 851 ACAGAAGGGG GCUUA--CUC CGUGGAUUCU CAUCU.. // LOCUS M.barkeri 887 bp DEFINITION M.barkeri 887 bp, 887 bases, 666103EA checksum. ORIGIN 1 CAUGCGAGAG AGGCUGGACG GCUGA-CGGG CC-------- ---------- 51 UUCG------ ---------- -----GG-UC UGAGGAAAGU CUCCCCAC-C 101 GCUCCGGA-- -----UACA- -CGA----AC AUCU-GUAAA GGAUGUC-GG 151 GC-GAGA--G CCCGGGCCCU GGC-ACAGAA ACGAUAACCA UCCUCUGA-- 201 AAAUGCGAUG AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- ------GC-- ---------- ---------G 351 GAA------- ---------- -----GC--- ---------- ---------- 401 ---------- --------UG AGAUC----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --U-CAGGGU --AAAU---G 601 GAUGAAACG- GCGA-ACCCU CG--UGG-GU GCAAGUU-GG A---AAUCGG 651 G--------- ---------- GAGAAGAGAA U----UCCGG ACUCU----- 701 ---------- ---------- ---------- ---------- ---------- 751 CCCG-GUUGU UUUUGGA-AA CGCAUAGCCG AAUGCCGUCA CUGCAAGAGU 801 CCUCAGGACC AUUUCCUCCA CU-GAUGGGU GAUAGGAAAU CUUUGCAGGA 851 ACAGAAGGGA GCUUA--CGU GCCUCACUCG CAUAAAC // LOCUS H.cutirubrum 887 bp DEFINITION H.cutirubrum 887 bp, 887 bases, E8473B08 checksum. ORIGIN 1 .....ggcag agggagcccg gcUGCCCGUG CC-------- ---------- 51 GUGA------ ---------- -----GG-CA UGAGGAAAGU CCCCCCAC-C 101 -CGUUCGGGC ------ACG- -CGG----CC GGAC-ACAC- GUCCGGG-GC 151 GG-GAGA--C CGCCGGCACU GGA-ACAGAC ACGA-CACGU CCCUCCCA-- 201 -CACC-GAUG A-------GG CGC------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- GCGAC-CC-- ACCC----C- ---------G 351 AAA------- --G------G GAC--GGCA- GUUAAC---- ---------- 401 ---------- ---CCGCC-G AGGGCG---U GGCCGCC--- ---------- 451 -ACACC---- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 GGCGGCCACG GACCGGUGAU CGACACCCCA A-U-GGGAGG --GGAG---C 601 GAUGGAACG- GCCA-ACCCC CG--CCG-GU GCAAGUCC-- ----ACGCG- 651 ---------- ---------- CGCA----UG GUAGCCCGAA C-----CACC 701 C--------G AAA------- -GGG------ ---------- ------GC-- 751 --CG-CGU-- -------GGA CGCUCAGCCG AAUGCCGGG- ---------- 801 ---------- ---------- ---CCG---- ---------- ---------A 851 ACAGAAGGGG GCuua--cuc cccucagcu- -cgua.. // LOCUS Halobacterium-NRC1 887 bp DEFINITION Halobacterium-NRC1 887 bp, 887 bases, 3A0B88F checksum. ORIGIN 1 .....GGCAG AGGGAGCCCG GCUCC-CGUG CC-------- ---------- 51 GUGA------ ---------- -----GG-CA UGAGGAAAGU CCCCCCAC-C 101 -CGUUCGGGC ------ACG- -CGG----CC GGAC-ACAC- GUCCGGG-GC 151 GG-GAGA--C CGCCGGCACU GGA-ACAGAC ACGA-CACGU CCCUCCCA-- 201 -CACC-GAUG A-------GG CGC------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- GCGAC-CC-- ACCC----C- ---------G 351 AAA------- --G------G GAC--GGCA- GUUAAC---- ---------- 401 ---------- ---CCGCC-G AGGGCG---U GGCCGCC--- ---------- 451 -ACACC---- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 GGCGGCCACG GACCGGUGAU CGACACCCCA A-U-GGGAGG --GGAG---C 601 GAUGGAACG- GCCA-ACCCC CG--CCG-GU GCAAGUCC-- ----ACGCG- 651 ---------- ---------- CGCA----UG GUAGCCCGAA C-----CACC 701 C--------G AAA------- -GGG------ ---------- ------GC-- 751 --CG-CGU-- -------GGA CGCUCAGCCG AAUGCCGGG- ---------- 801 ---------- ---------- ---CCG---- ---------- ---------A 851 ACAGAAGGGG GCUUA--CUC CCCUCAGCU- -CGUAU. // LOCUS H.volcanii 887 bp DEFINITION H.volcanii 887 bp, 887 bases, 3300E8DF checksum. ORIGIN 1 .....GGCAG AGAGAGCCCA GUUCC-CGUG CCCG------ ---------- 51 AGA------- ---------- -CG--GG-CA UGAGGAAAGU CCCCCCAC-C 101 -GUCCGAAC- ------GGG- -UGA----CC GGGC-GCAA- GCCCGGA-GU 151 CG-GAGA--C GGCUGGCGCU GGA-ACAGAA ACGA-GACCG CUCGACCC-- 201 -GACC-GAUG A-------UG CG-CGCGCGA CGGCUCCGCC GUCGCCG--G 251 CGCGGCCG-- ---------- UCA------- ---------- ---------- 301 ---------- -CGGCCGCGU GCGAA-CC-- GACC----C- ---------G 351 UAA------- --G------G GAA--GGGA- GCUAAC---- ---------- 401 ---------- ---CCGCA-G AGGGAU---G AGGUGGC--- ---------- 451 ---GUC---- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 GCCAUCUCCG A--------- ---------- --C-GGUCGA --GAAC---G 601 GAUGGAACG- GCGA-AUCCU CA--CCG-GU GCAAGUCC-- ----GCGCC- 651 ---------- ---------G CGAA----GG GUA-GUUCGG A------CGG 701 CGCGUCGGGU UCGCCCGUCG CGCCCUCGGG GGGCUCGCCC CGAG--AA-- 751 --GG-CGC-- -------GGA CGCUGAGCCG AAUGCUGGG- ---------- 801 ---------- ---------- ---ACG---- ---------- ---------A 851 ACAGAAGGGG GCUUA--CUC CUCUCAGCC- -GCUU.. // LOCUS H.trapanicum 887 bp DEFINITION H.trapanicum 887 bp, 887 bases, B9E546DE checksum. ORIGIN 1 .....ggcag agagagcccg gcCAC-CGCG GCGUGCC--- AGCAGCA--C 51 GCAGC--UGC CAGCG---GG CAC--GCACG CGAGGAAAGU CCCCCCAC-C 101 -GCCGGGC-- ------AGG- -UGA----CC GGGG--AAA- CCCCGGG-AC 151 GG-GAGA--C CGUCGGCGCU GGA-ACAGCA ACGA-GACCG CUCCCCCG-- 201 -CGA--GUGG AUGAC---GU GGC------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- GCGAA-CC-- GACC----C- ---------G 351 CGA------- --G------G GAA--GGGA- GCUAAC---- ---------- 401 ---------- ----CCACAG AACGCAGAC- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --C-GGGGGA --GAAC---G 601 GAUGGAACG- GCGA-ACCCU CA--CCG-GU GCAAGUCC-- ----ACGCC- 651 ---ACGCGGC GCGAGCCGC- ---A----CG GUA--GCCCG G----CAG-- 701 ---------- ---------- ---------- ---------- ---------- 751 --GGACGU-- -------GGA CGCUCAGCCG AAUGCCGGG- ---------- 801 ---------- ---------- ---ACG---- ---------- ---------A 851 ACAGAAGGGG GCuua--cuc cucucagcc- -acuu.. // LOCUS H.morrhuae 887 bp DEFINITION H.morrhuae 887 bp, 887 bases, 76C5B7FA checksum. ORIGIN 1 .....GGCAG AGAGAGCCCG GCCAC-CGCG GCGUACC--- GACAGGCAC- 51 ACAC-GUGCC AGCG----GG UAC--GCACG CGAGGAAAGU CCCCCCAC-C 101 -GCCGGGC-- ------AGG- -UGA----CC GGGG--AAA- CCCCGGG-AC 151 GG-GAGA--C CGUCGGCGCU GGA-ACAGCA ACGA-GACCC CUCCACCC-- 201 -GACC-GAUG A-------GG CGCGG-GCGG UGGCAUCGCC ACCGUCUCGG 251 CGCGAGCGGC ACGGGGUGCA UCGUGCGCCC CGAAGCGAGC GGGCACCGCC 301 CGCGACGCAG CCGCGAGCGU GCGAA-CCCG ACGCAAAACG GCC------- 351 ACU-----GG UCGGACAAAG CAACGGGGA- GCUAAC---- ---------- 401 ---------- ---CCGCC-G AGGGAUGA-- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --G-GGUGGA --GAAC---G 601 GAUGGAACG- GCGA-AUCCU CA--CCG-GU GCAAGUCC-- ----ACGCC- 651 ---ACGCGGA UCG-GCCGC- ---A----CG GUA-GCCCGG C-----AG-- 701 ---------- ---------- ---------- ---------- ---------- 751 --GGACGU-- -------GGA CGCUCAGCCG AAUGCCGGG- ---------- 801 ---------- ---------- ---GCG---- ---------- ---------A 851 ACAGAAGGGG GCUUA--CUC CUCUCAGCC- -AUGU.. // LOCUS N.gregoryi 887 bp DEFINITION N.gregoryi 887 bp, 887 bases, 57C599AE checksum. ORIGIN 1 .....GGGAG AGAGAGCCCG GCUGC-CGCG GGCGUC---- ---------- 51 GUGC------ ---------G ACG--CG-CG CGAGGAAAGU CCCCCCAC-C 101 -UGUUCGGGC ------AGG- -UGA----CC AGAC-GCAA- GUCCGGG-GC 151 GG-GAGA--C CGCUGGCUCU GGA-ACAGAA ACGA-CACGU CUCGGCCC-- 201 -GACC-GAUG A-------UG CGU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- GCGAA-CCC- GACC------ ---------G 351 CGA------- ---------G GAA-GGGGA- GUUGAC---- ---------- 401 ---------- ---CCGCA-G AGGG-----A GUGUGGUCGG UAUCCCGUGG 451 UUCGAAUCCA CGGAUUGCGA GCGCGGUUCG ACGCGUCUCU GACGCGGGAC 501 CCGCGACCGA GUGCGACGGC ACGAGCCGUC GAACACGCAC GGCGCGAUUG 551 ACCACACUGA GA-------- ---------- --C-GGCCGA --GGAG---C 601 GAUGGAACG- GCGA-ACCCU CA--CCG-GU GCAAGUCC-- ----GUGCC- 651 ---------- ---------- ---G----UG GUAGCCCGAA C----AUCUC 701 GCGGC----- UCC----GCC GCGA------ ---------- ------AC-- 751 --GG-CGC-- -------GGA CGCUUAGCCG AAUGCUGGG- ---------- 801 ---------- ---------- ---ACG---- ---------- ---------A 851 ACAGAAGGGG GCUUA--CUC CUCUCACCC- -GUUU.. // LOCUS SLC 887 bp DEFINITION SLC 887 bp, 887 bases, 5D6C73FD checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaacu ccacccAU-C 101 -AUACAG--- -----AACC- -GUG----AU GCC--AGCA- -GGCAUC-UG 151 CU-GAGA--A GCAGGACACU GGA-GCAGAA ACGA-UAUGU UUUCUAAUG- 201 -GAC--GAAC AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAU-GC-- --U------- ---------U 351 AAA------- ---------- U----GC--- ---------- ---------- 401 ---------- --------UG AUGGA----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CA-UUAGAA --A--AAUAC 601 AGUGAAACG- GCUA--UUCC AC--GGG-AU GCAAGGACAA AUA-CUGUU- 651 ---------- ---------- -UAU-GGAUC ------CUGU AUGA------ 701 ---------- ---------- ---------- ---------- ---------- 751 --AA-CAG-- --AGGUAGUC CGCAAAGAUG AAUGCUGCU- ---------- 801 ---------- ---------- ----AA---- ---------- ---------A 851 acagaaggug gguua..... .......... ....... // LOCUS E1B 887 bp DEFINITION E1B 887 bp, 887 bases, 3C9559B5 checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu ccagccAC-C 101 -ACUGGAC-- ------ACA- -CAG----AC AUUCCCCCAA GGAUGUA-GG 151 GC-GAGA--G CUCUGGCUCU GGC-ACAGAA ACGA-GACCG CGCCGCGU-- 201 --AA--AGCG AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAU-GC-- --C------- ---------G 351 CAA------- ---------- G----GC--- ---------- ---------- 401 ---------- --------UG AGGUC----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --G-CGCGGG AGG--C---G 601 GAUGAAACG- GCGA-AACCC UG--UGG-GU GCAAGCCAAA AUA-GAGCU- 651 ---GA----- ---------G AACG-CGGAC -----GUCCA GCCG------ 701 ---------- ---------- ---------- ---------- ---------- 751 --AG-CUC-- --GGGUAUgG CGCUAAGCUG AAUGCCGUC- ---------- 801 ---------- ---------- --AAAGA--- ---------- ---------A 851 acaaaagcug gcuua..... .......... ....... // LOCUS SL1-1 887 bp DEFINITION SL1-1 887 bp, 887 bases, 368E51C checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu ccacccAC-C 101 -ACUGGAC-- ------ACA- -CAG----AC AUUUCCCCAA GGAUGUA-GG 151 GC-GAGA--G CUCUGGCUCU GGC-ACAGAA ACAA-GACCG CACCGCGU-- 201 -CAA--AGCG AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAU-GC-- --C------- ---------G 351 UAA------- ---------- G----GC--- ---------- ---------- 401 ---------- --------UG AGGUC----- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- --G-CGCGGG AGG--C---G 601 GAUGAAACG- GCGA-AACCC UG--UGG-GU GCAAGCCAAA AUA-GAGCU- 651 ---GA----- ---------G AACG-CGGAC -----GUCCA GCCG------ 701 ---------- ---------- ---------- ---------- ---------- 751 --AG-CUC-- --GGGUAUGG CGCUAAGCUG AAUGCCGUC- ---------- 801 ---------- ---------- --AAAG---- ---------- ---------A 851 acagaagcgg gcuua..... .......... ....... // LOCUS SL2D 887 bp DEFINITION SL2D 887 bp, 887 bases, 1539E9FA checksum. ORIGIN 1 .......... .......... .......... .......... .......... 51 .......... .......... .......... .gaggaaagu ccacccAC-C 101 -UGCUGAGC- ------GCG- -CAG----CC GUAU-GCAA- GUACGGG-UG 151 GC-GAGA--G UCACGGCUAU GGC-ACAGAA ACGA-CACGG CCUGCCC--C 201 CAGC--CAUG AU------GC GAU------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --CGA-GU-- --CC----A- ---------U 351 UCG------- --U------G G----GCAAU ------GCGU CCGCUCCCAA 401 CAAGCGCGGA UGUCUCGCUG AUGCAUAA-- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- ----GGGUAG --G--U-AGC 601 GACGAAACG- GUGA--AUCC UG--CGG-GU GCAAGCCAAA ACA-GGGCA- 651 ---------- ---------- ACAA-GGCU- ----GCUCAG UGCC------ 701 ---------- ---------- ---------- ---------- ---------- 751 --UG-CCC-- --GGGUAUGG CGCGUAGCUG AAUUGCCGC- ---------- 801 ---------- ---------- ---ACC---- ---------- ---------G 851 acagaagcgg gcuua..... .......... ....... // LOCUS pairing_mask 887 bp DEFINITION pairing_mask 887 bp, 887 bases, C5A62C33 checksum. ORIGIN 1 ...((((((( (((((((((( ((----(((( (((((((((( ----(((((- 51 -----))))) -----))))) )))--))-)) ))----{{{- {{{{{((((( 101 --[[[[[[[[ -------((( ((((----(( ((((------ ))))))(-(( 151 (((-----)) ))))(((((( ((((------ -------((( (((((((((- 201 ---------- --------(( ((-((-(((( ((((---))) )))))))--( 251 (((((((((( -((((((((( ---))))))) ))--(((-(( ((((---))) 301 )))--)))-) )))))))))) ((----(((( --((----(( ((((((---- 351 -----))))) )))------) )--))))--- ))----(((( ((((------ 401 -----))))) )))-))))-- ---------( (((((((((( (---(((((( 451 -------))) )))--((((- -((((((((- -((((((--- )))))))))) 501 )-)))-(((( (((((((((( ----)))))) )----))))) )))))))))) 551 ))))))))-- ----((((-- ---))))--- -))-)))))) --)--)---) 601 )--------) )))))))))) )))))))))) )---((((-- ----(((((( 651 (((--((((( ----)))))- ----((((-- ---]]]]]]] ]))))---(( 701 (((((((((- ---))))))) ))))(((((( (------))) ))))----)) 751 ))))-)))-- -------))) )--------- ---))))))( (((((((-(( 801 ((---))))- (((((((-(( ((-----))) )--))))))) -))))))))- 851 ------}}}} }}}}---))- )))))))))) )...... // LOCUS A.fulgidus 887 bp DEFINITION A.fulgidus 887 bp, 887 bases, E27CCEFF checksum. ORIGIN 1 ........CG GCGGUGGGCG GCUGA-CC-- ---------- ---------- 51 GAAA------ ---------- ---------- GGAGGAAAGU CCCCCCACCC 101 ---------- --GCUGUGG- -CGG-AAG-- ---------- ------G-CC 151 CCUGAGA-AG GGGCGGAGGA GGA-ACAGAA ACGA-GACCG GUGCGGGGA- 201 -AAU---GCG A--------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --UGAUUC-- --C------- ---------G 351 CAA------- ---------- G----GA--- ---------- ---------- 401 ---------- --------UG AGG------- ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UCACCCGCU --C--C---G 601 GAUGAAACG- GCCUCCUCCC CG--CCGGGU GCAACGC-GU ---------- 651 ---------- ---------- ---------- ---------- ---------- 701 ---------- ---------- ---------- ---------- ---------- 751 ---------- -----AA-GC GGCUCAGUCU AAUGCCGCC- ---------- 801 ---------- ---------- ----GG---- ---------- ---------A 851 ACAGAAGGGG GCUUAC-UA- CCGCCA.... ....... // LOCUS M.jannaschii 887 bp DEFINITION M.jannaschii 887 bp, 887 bases, D440AA74 checksum. ORIGIN 1 ........AG GGGGCUGGUG ACUUU-CCCC UCU------- ---------- 51 -UUA------ ---------- --A--GA-GG GGAGGAAGUU CCGCCCACCC 101 ---------- -CAUUUAUGG GCAG---C-- ---------- ------GUCC 151 CCUGAGA-AG GGGCGGGAGA UGCAGCAGAA ACGA-CACGG CUCCGGAAG- 201 AGAU--GACG AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAUAGU-- ---------- ---------G 351 AAA------- ---------- -----GU--- ---------- ---------- 401 ---------- --------UG AGGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -CU-UCCGGA --GAAC---C 601 GGUGAAACGG GCAUCUCCCC UGCCCGGGGU GCAAGCCGGU ---------- 651 ---------- ---------- ---------- ---------- ---------- 701 ---------- ---------- ---------- ---------- ---------- 751 ---------- -----UUCGG CGCUUAGCCG AAUGUCACC- ---------- 801 ---------- ---------- --GAAAU--- ---------- ---------U 851 ACAGAAGGCG GGCUAU-AG- CCCCCA.... ....... // LOCUS M.thermolithotrophicus 887 bp DEFINITION M.thermolithotrophicus 88, 887 bases, F3A9CD4B checksum. ORIGIN 1 ........ag ggggcuggug ACUAU-CC-- ---------- ---------A 51 AUUG------ ---------- ---------- GGAGGAAGCU CCGCCCACCC 101 ---------- ----AUUAU- -GUGCAAC-- ---------- ------A-AU 151 CCCGAGA-GG GAUUGAAUGG GGC-AUAGAA ACGA-CACGG CCUUAAAAC- 201 AGAU--GACG AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAU-AU-- ---------- -------CCG 351 AAA------- ---------- -----AU--- ---------- ---------- 401 ---------- --------UG AGGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -GU-UUUAAG --GAAU---C 601 GGUGAAACG- GCCCCAUUCU GC--ACGGGU GCAAGC--AU ---------- 651 ---------- ---------- ---------- ---------- ---------- 701 ---------- ---------- ---------- ---------- ---------- 751 ---------- -----UA--G CGUUUAGCUG AAUGUCGCC- ---------- 801 ---------- ---------- --GAAAU--- ---------- ---------U 851 ACAGAAGGCG Ggcuau-ag- ccccca.... ....... // LOCUS M.maripaludus 887 bp DEFINITION M.maripaludus 887 bp, 887 bases, 26FF019C checksum. ORIGIN 1 ........ag ggggcuggug ACUAU-CC-- ---------- ---------- 51 ACUG------ ---------- ---------- GGAGGAAGCU CUGCCCACCC 101 ---------- ---AAUUGU- -GUA---G-- ---------- ------AUUU 151 CCUGAGA-AG GAAUGAAUAG GGU-AUAGAA ACGA-CACGG UUCUAAGAA- 201 AUAU--GACU AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAU-AU-- --U------- --------UU 351 CAA------- ---------- A----AU--- ---------- ---------- 401 ---------- --------UG AGGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UU-CUUAGA --AAAU---C 601 GAUGAAACG- ACCUUAUUUU AC--ACGGGU GCAAGC--AU ---------- 651 ---------- ---------- ---------- ---------- ---------- 701 ---------- ---------- ---------- ---------- ---------- 751 ---------- -----AU--G UGCUAAGCUG AAUGUCACC- ---------- 801 ---------- ---------- --GAAAU--- ---------- ---------U 851 ACAGAAGGCA Ggcuau-ag- ccccca.... ....... // LOCUS M.vannielli 887 bp DEFINITION M.vannielli 887 bp, 887 bases, DDDC8A6D checksum. ORIGIN 1 ........ag ggggcuggug ACUAU-CC-- ---------- ---------A 51 ACUG------ ---------- ---------- GGAGGAAGCU CUGCCCACUC 101 ---------- ---AAUUAC- -GUA---G-- ---------- ------AUUU 151 CCUGAGA-AG GAAUAAACAA AGU-AUAGAA ACGA-CACGG UUCCAAAAA- 201 AUAU--GACU AU-------- ---------- ---------- ---------- 251 ---------- ---------- ---------- ---------- ---------- 301 ---------- ---------- --GAU-AU-- --U------- ---------U 351 UAA------- ---------- A----AU--- ---------- ---------- 401 ---------- --------UG AGGA------ ---------- ---------- 451 ---------- ---------- ---------- ---------- ---------- 501 ---------- ---------- ---------- ---------- ---------- 551 ---------- ---------- ---------- -UU-UUUGGA --AAAU---C 601 GAUGAAACG- ACUUUGUUUU GC--GUGAGU GCAAGC--AU ---------- 651 ---------- ---------- ---------- ---------- ---------- 701 ---------- ---------- ---------- ---------- ---------- 751 ---------- ----UAU--G CGCUAAGCUG AAUGUCACC- ---------- 801 ---------- ---------- --GAAAU--- ---------- ---------U 851 ACAGAAGGCA Ggcuau-ag- ccccca.... ....... //