RNase P Database

Low G+C Gram positive RNase P sequences & structures

RNA secondary structures on this page are based on the model of Harris, et al., 2001 RNA 7:220.

Organism		RNA			Protein	Comments
Genus/species	Strain	Seq ID	Seq citation ID	Structure files	rnpA	Comments
Type A RNAs
Carboxydothermus hydrogenoformans		- NA -	- NA -	.gb \| .ct \| .rnaml \|
Clostridium acetobutylicum		- NA -	- NA -	.gb \| .ct \| .rnaml \| .pdf
Clostridium difficile		- NA -	- NA -	.gb \| .ct \| .rnaml \|
Clostridium sporogenes	388	U64879	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
Eubacterium thermomarinus	ES-2	U64880	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
Salt Marsh A01		AF296071	11233979	.gb \| .ct \| .rnaml \|		Environmental/partial
Type B RNAs
Acholeplasma laidlawii	JA-1	U64877	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
Bacillus anthracis		- NA -	- NA -	.gb \| .ct \| .rnaml \|
Bacillus brevis	ATCC 8185	M19023	88151024	.gb \| .ct \| .rnaml \| .pdf
Bacillus halodurans	C-125	AP001513	10427704	.gb \| .ct \| .rnaml \|	AB013492
Bacillus megaterium	KM	M19022	88151024	.gb \| .ct \| .rnaml \| .pdf
Bacillus stearothermophilus	1430R	M19021	88151024	.gb \| .ct \| .rnaml \| .pdf
Bacillus subtilis	168	M13175	86224088	.gb \| .ct \| .rnaml \| .pdf
	168	X62539	92204018	rnpA.gb
	168	AL009126	98044033	.gb \| .ct \| .rnaml \| .pdf	AL009126
Clostridium innocuum	ATCC 14501	U64878	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
Enterococcus faecalis	JCM 5808	U64887	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
	V583	- NA -	- NA -	.gb \| .ct \| .rnaml \| .pdf
Erysipelothrix rhusiopathiae		AF295989	11233979	.gb \| .ct \| .rnaml \|		partial
Heliobacillus mobilis	ATCC 43427	U64882	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
Heliobacterium chlorum	ATCC 35204	U64881	97128272	.gb \| .ct \| .rnaml \| .pdf		Only a fragment
	ATCC 35204	AF056391	9722626	.gb \| .ct \| .rnaml \| .pdf		partial
Lactobacillus acidophilus	ATCC 4356	U64883	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
Mycoplasma capricolum	mcs5	D13066	94068010	.gb \| .ct \| .rnaml \| .pdf	P14982
Mycoplasma fermentans	PG-18	U41756	96238831	.gb \| .ct \| .rnaml \| .pdf
Mycoplasma flocculare	Ms42	X69983	94293758	.gb \| .ct \| .rnaml \| .pdf
Mycoplasma genitalium	G-37	U39713	96026346	.gb \| .ct \| .rnaml \| .pdf	U39728
Mycoplasma hyopneumoniae	J	X69982	94293758	.gb \| .ct \| .rnaml \| .pdf
Mycoplasma pneumoniae	M-129	U00089	97105885	.gb \| .ct \| .rnaml \| .pdf	U00089
Staphylococcus aureus	aureus	U64885	97128272	.gb \| .ct \| .rnaml \| .pdf		partial
	WCUH29	AF151218	- NA -	.gb \| .ct \| .rnaml \| .pdf
	ISP3				AF135268
Staphylococcus epidermidis	SR1	AF270069	- NA -	.gb \| .ct \| .rnaml \|
Streptococcus bovis	ATCC 33317	AF295988	11233979	.gb \| .ct \| .rnaml \|		partial
Streptococcus equi	equi	AF295987	11233979	.gb \| .ct \| .rnaml \|		partial
		- NA -	- NA -	.gb \| .ct \| .rnaml \|
Streptococcus gordonii		- NA -	- NA -	.gb \| .ct \| .rnaml \| .pdf
Streptococcus faciem	JCM	U64886	97128272	.gb \| .ct \| .rnaml \|		partial
Streptococcus mutans		- NA -	- NA -	.gb \| .ct \| .rnaml \|
Streptococcus pneumoniae	type 4	- NA -	- NA -	.gb \| .ct \| .rnaml \| .pdf
Streptococcus pyogenes	M1	- NA -	- NA -	.gb \| .ct \| .rnaml \| .pdf
Ureaplasma urealyticum	3/1	AE002128	11048724	.gb \| .ct \| .rnaml \|	AE002158

Last updated May 25, 2006
James W. Brown
Department of Microbiology, NC State University
Raleigh, NC 27695 USA
james_brown@ncsu.edu
www.mbio.ncsu.edu/JWB