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Gamma Purple Bacteria RNase P sequences & structures 

RNA secondary structures on this page are based on the model of Harris, et al., 2001 RNA 7:220.

Organism RNA Protein Comments
Genus/species
Strain
Seq ID
Seq citation ID
Structure files
rnpA
Acidothiobacillus ferrooxidans
.gb | .ct | .rnaml | .pdf
 
 
ATCC 23270
- NA -
.gb | .ct | .rnaml | .pdf
 
Azotobacter vinlandii
CA
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
Azotobacter paspali
28333
- NA -
- NA -
.gb | .ct | .rnaml |
partial
Azotobacter salinestris
184
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
Azotobacter chroococcum
ATCC 9043
- NA -
- NA -
.gb | .ct | .rnaml |
partial
Azomonas macrocytogenes
123
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
Buchnera aphidocola
   
 
SGS
       
Buchnera sp.
APS
.gb | .ct | .rnaml |  
Allochromatium vinosum
HPC
.gb | .ct | .rnaml | .pdf
 
Haemophilus influenza .gb | .ct | .rnaml | .pdf  
Klebsiella pneumoniae
.gb | .ct | .rnaml | .pdf
 
Leclercia adecarboxylata
LBV 449
.gb | .ct | .rnaml |
partial
Escherichia coli
W3110
.gb | .ct | .rnaml | .pdf
 
 
       
  .gb | .ct | .rnaml | .pdf  
 
JM109
- NA -
.gb | .ct | .rnaml |
 
 
0157:H7
EDL933
.gb | .ct | .rnaml |  
 
0157:H7
RIMD 0509952
- ? -
.gb | .ct | .rnaml |  
Erwinia agglomerulans
.gb | .ct | .rnaml | .pdf
 
Pasteurella aerogenes
ATCC 27883
.gb | .ct | .rnaml |
partial
Providencia alcalifaciens
ATCC 9886
.gb | .ct | .rnaml |
partial
Plesiomonas shigelloides
M51
.gb | .ct | .rnaml |
partial
Proteus mirabilis
       
Proteus vulgaris
IFAM 1731
.gb | .ct | .rnaml | .pdf
partial
Pseudomonas aeruginosa
PAO1
- ? -
.gb | .ct | .rnaml | .pdf  
Pseudomonas fluorescens
type C
.gb | .ct | .rnaml | .pdf
 
Pseudomonas putida
IAM 1236
- NA -
- NA -
.gb | .ct | .rnaml |
partial
 
       
Pseudomonas azotoformans
IAM 1603
- NA -
- NA -
.gb | .ct | .rnaml |
partial
Pseudomonas stutzeri
IAM 12668
- NA -
- NA -
.gb | .ct | .rnaml |
partial
Salmonella typhi
CT18
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
- NA -
 
Salmonella typhimurium
LT-2
.gb | .ct | .rnaml | .pdf
 
Serratia liquefaciens
JCM 1245
.gb | .ct | .rnaml |
partial
Serratia marcescens
.gb | .ct | .rnaml | .pdf
 
Shewanella putrefaciens
MR-1
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
 
Vibrio cholerae
N16961
- ? -
.gb | .ct | .rnaml | .pdf
 
 
       
Yersinia pestis
CO-92 Orientalis
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
- NA -
 
Xyelella fastidiosa
.gb | .ct | .rnaml |  
volunteer ESH7-9
.gb | .ct | .rnaml | .pdf
environmental/partial
volunteer ESH7-16
.gb | .ct | .rnaml | .pdf
environmental/partial
volunteer ESH17b-7
.gb | .ct | .rnaml | .pdf
environmental/partial
volunteer ESH20b-4
.gb | .ct | .rnaml | .pdf
environmental/partial
volunteer ESH21b-4
.gb | .ct | .rnaml | .pdf
environmental/partial
Yellowstone Black Hole#145
.gb | .ct | .rnaml | .pdf
environmental/partial
Yellowstone Pit#126
.gb | .ct | .rnaml | .pdf
environmental/partial
Yellowstone Pit#131
.gb | .ct | .rnaml | .pdf
environmental/partial
Lake Griffy W #23
.gb | .ct | .rnaml | .pdf
environmental/partial
volunteer PurpleX
.gb | .ct | .rnaml | .pdf
environmental/partial
volunteer Hge2
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A02
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A03
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A07
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A09(11)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A14(17)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A15(19)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A19(32)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A20(33)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A22(37)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A29(46)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A32(54)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A33(55)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A34(56)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A36(59)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A38(62)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A40(65)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A47(75)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A51(79)
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A53(82)
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile A54
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile A63
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B139
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B141
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile A52
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B147
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B71
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B73
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B74
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B75
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B80
.gb | .ct | .rnaml | .pdf
environmental/partial
Compost Pile B86
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh B-B1
.gb | .ct | .rnaml | .pdf
environmental/partial
uncharacterized N2 fixer DU1
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
uncharacterized N2 fixer TP1
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
uncharacterized N2 fixer UK2
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
uncharacterized N2 fixer WC1
- NA -
- NA -
.gb | .ct | .rnaml | .pdf
partial
uncharacterized N2 fixer SM1
- NA -
- NA -
.gb | .ct | .rnaml |
partial
uncharacterized N2 fixer SM2
- NA -
- NA -
.gb | .ct | .rnaml |
partial
uncharacterized N2 fixer WA1
- NA -
- NA -
.gb | .ct | .rnaml |
partial
uncharacterized N2 fixer WB3
- NA -
- NA -
.gb | .ct | .rnaml |
partial
uncharacterized N2 fixer UK5
- NA -
- NA -
.gb | .ct | .rnaml |
partial
Vet School Drainage Water
.gb | .ct | .rnaml | .pdf
environmental/partial
drainage fluid
.gb | .ct | .rnaml | .pdf
environmental/partial
Salt Marsh A05 (= E.coli)
.gb | .ct | .rnaml | .pdf
environmental/partial

Last updated May 25, 2006
James W. Brown
Department of Microbiology, NC State University
Raleigh, NC 27695 USA
james_brown@ncsu.edu
www.mbio.ncsu.edu/JWB