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Euryarchaeal RNase P sequences & structures
RNA secondary structures on this page are based on the model of Harris, et al., 2001 RNA 7:220.
Organism | RNA | Proteins | Comments | ||||||
Genus/species | Strain |
Seq ID |
Seq citation ID |
Structure files |
aPOP4 |
aRPR2 |
aPOP5 |
aRPP1 | |
Type A RNAs |
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Halobacterium cutirubrum | .gb | .ct | .rnaml | .pdf | terminal primer sequences | |||||||
Halobacterium sp. | .gb | .ct | .rnaml | .pdf | ||||||||
Halorubrum trapanicum | NRC 34021 |
.gb | .ct | .rnaml | .pdf | terminal primer sequences | ||||||
Halococcus morrhuae | LD.3.1 |
.gb | .ct | .rnaml | .pdf | |||||||
Haloferax volcanii | DS-2 |
.gb | .ct | .rnaml | .pdf | |||||||
Methanobacterium formicicum | DSM 1312 |
.gb | .ct | .rnaml | .pdf | |||||||
Methanobacterium thermoautotrophicum | delta H |
.gb | .ct | .rnaml | .pdf | Mth11p | Mth1618p | Mth688p | Mth687p | terminal primer sequences | ||
delta H |
.gb | .ct | .rnaml | .pdf | ||||||||
delta H |
.gb | .ct | .rnaml | .pdf | terminal primers - not identical to the above | |||||||
.gb | .ct | .rnaml | .pdf | terminal primer sequences | ||||||||
.gb | .ct | .rnaml | .pdf | |||||||||
Methanosarcina barkeri | 227 |
.gb | .ct | .rnaml | .pdf | |||||||
Methanothermus fervidus | V245 |
.gb | .ct | .rnaml | .pdf | partial | ||||||
Natronobacterium gregoryi | SP2 |
.gb | .ct | .rnaml | .pdf | |||||||
Thermococcus celer | AL-1 |
.gb | .ct | .rnaml | .pdf | partial | ||||||
AL-1 |
.gb | .ct | .rnaml | .pdf | ||||||||
Thermococcus litoralis | .gb | .ct | .rnaml | .pdf | partial | |||||||
Thermoplasma acidophilum | DSM 1728 |
.gb | .ct | .rnaml | .pdf | |||||||
Thermoplasma volcanum | .gb | .ct | .rnaml | .pdf | ||||||||
Pyrococcus abyssi | GE5 |
- NA - |
.gb | .ct | .rnaml | .pdf | ||||||
Pyrococcus furiosus | Vc1 |
- NA - |
- NA - |
.gb | .ct | .rnaml | .pdf | |||||
Vc1 |
.gb | .ct | .rnaml | .pdf | ||||||||
Pyrococcus horikoshii | OT3 |
.gb | .ct | .rnaml | .pdf | Pho1771p | Pho1601p | Pho1481p | Pho1877p | |||
Wastewater SL2D | .gb | .ct | .rnaml | .pdf | environmental/partial | |||||||
Wastewater SL-C | .gb | .ct | .rnaml | .pdf | environmental/partial | |||||||
Enrichment 1B | .gb | .ct | .rnaml | .pdf | environmental/partial | |||||||
Enrichment E | .gb | .ct | .rnaml | .pdf | environmental/partial | |||||||
Enrichment H | .gb | .ct | .rnaml | .pdf | environmental/partial | |||||||
Sludge 1-1 | .gb | .ct | .rnaml | .pdf | environmental/partial | |||||||
Type M RNAs |
|||||||||
Archaeoglobus fulgidus | DSM 4304 |
.gb | .ct | .rnaml | .pdf | |||||||
Methanococcus jannaschii | JAL-1 |
.gb | .ct | .rnaml | .pdf | Mja464p | Mja962p | Mja494p | Mja1139p | |||
Methanococcus marapaludis | JJ |
.gb | .ct | .rnaml | .pdf | terminal primer sequences | ||||||
Methanococcus thermolithotrophicus | SN-1 |
.gb | .ct | .rnaml | .pdf | terminal primer sequences | ||||||
Methanococcus vannielii | EY-33 |
.gb | .ct | .rnaml | .pdf | terminal primer sequences |