BioEdit.zipchangesinfoBioDoc.pdfScreeshots
BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP.  An intuitive multiple document interface with convenient features  makes alignment and manipulation  of sequences relatively easy on your desktop computer.    Several sequence manipulation and analysis options and links to external anaylsis programs facilitate a working environment which allows you to view and manipulate sequences with simple point-and-click operations.
  BioEdit's features include:                      New version is WinXP compatible 
  • Several modes of hand alignment
  • Automated ClustalW alignment
  • Automated Blast searches (local and WWW)
  • Plasmid drawing and annotation
  • Accessory application configuration
  • Restriction mapping
  • RNA comparative analysis tools
  • Graphical matrix data viewing tools
  • Shaded alignment figures
  • Translation-based nucleic acid alignment
  • ABI trace viewing, editing and printing
  • Customizable ... other features
  • Note: Although BioEdit was recently updated, it is no longer being reliably maintained, and the documentation is out of date and no longer maintained.  It is being updated slowly, but there is no guaranteed finish date.  Until documentation is complete, play with the menus and see what happens, or email with a question.

    Note:  If you have trouble launching BioEdit on Windows NT, try replacing BioEdit.exe with this version

    Note: To avoid potential problems with the use of BioLign (contig assembly), it has been removed from the internet because I do not currently have time to respond to problems with its use.

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    Current version 7.0.5
    Last updated 5/31/05
    Tom Hall
    thall@isisph.com

    RNaseP database ReadMe file See screen shots Accessory applications Multi-file download email Tom

    Older BioEdit versions:
    Note:  There have been some requests to go back to version 5.0.9.  If you would like to download the 5.0.9 installation, you can get it here.

    Other versions:
    Version 7.0.4
    Version 7.0.3
    Version 7.0.2
    Version 7.0.1
    Version 7.0.0