[IdPlot identity plotter] Program=\apps\IdPlot.exe Auto-Feed=1 Degap Sequences=0 Auto-Feed File Format=1 Auto-Feed File Name Required=0 Specific File Name= Prompt for Input File=0 Prompt for Output File=0 Open Output as Alignment=1 Open Output as Text=0 Open Output with External Program=0 External Program Name= Input File Prefix=-i Output File Prefix=-o Specify Input File Name=0 Specify Output File Name=0 Input File Name= Output File Name= Input File Prefix Required=1 Space after input prefix=1 Output File Prefix Required=1 Space after output prefix=1 Input File Name Arbitrary=1 Output File Name Arbitrary=1 Redirect input from stdin=0 Redirect output from stdout=0 Default Command Line= View Documentation Option=0 Documentation File= Description= Include Additional Options Box=0 Redirect General stdout=0 Stdout Redirected Filename= Redirect General stdin=0 Stdin Redirected Filename= Add input file to command line=1 Add output file to command line=1 output command at beginning=1 input command at beginning=1 output command at end=0 input command at end=0 c0 Title=Use consensus sequence as standard (must be named "consensus") c0YES=-c c0NO= c0 Default=0 c1 Title=Verbose c1YES=-v c1NO= c1 Default=0 c2 Title=Ignore gaps in reference sequence c2YES= c2NO=-g c2 Default=1