14 Populations Neighbor-Joining/UPGMA method version 3.573c Data set # 1: Neighbor-joining method Negative branch lengths allowed +B-elizabet +--5 +-10 +B-grahamii ! ! ! +B-birtlesi +-12 ! ! +B-berhoffi ! ! +--8 ! ! ! ! +B-vinsonii ! +-11 +--7 +--9 ! +B-arupensi ! ! ! ! ! +B--doshiae ! ! ! ! +B-henselae +--4 +--6 ! ! +B-quintana ! ! ! ! +B--weissii ! ! +--1 ! +--3 +B-spp-Deer ! ! ! +B-bacillif ! --2B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00278 4 9 0.00594 9 12 0.00104 12 10 0.00046 10 5 0.00203 5 B-elizabet 0.01033 5 B-grahamii 0.00587 10 B-birtlesi 0.01247 12 11 0.00029 11 8 0.00167 8 B-berhoffi 0.00570 8 7 0.00080 7 B-vinsonii 0.00402 7 B-arupensi 0.00468 11 B--doshiae 0.00425 9 6 0.00181 6 B-henselae 0.00656 6 B-quintana 0.01144 4 3 0.00072 3 1 0.00982 1 B--weissii 0.00320 1 B-spp-Deer 0.00770 3 B-bacillif 0.01238 2 B-clarridg 0.01450 2 A-tumefaci 0.09660 Data set # 2: Neighbor-joining method Negative branch lengths allowed +B-quintana +--6 +--8 +B-henselae ! ! ! +B-elizabet ! +-11 +B-birtlesi ! ! +-10 ! ! ! ! +B--doshiae ! ! ! +--9 ! +-12 +B-grahamii ! ! ! ! +B-berhoffi ! ! +--5 ! +--7 +B-arupensi ! ! ! +B-vinsonii ! ! +B-bacillif ! ! --4--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 11 0.00529 11 8 0.00096 8 6 0.00159 6 B-quintana 0.01064 6 B-henselae 0.00656 8 B-elizabet 0.00916 11 12 0.00018 12 10 0.00089 10 B-birtlesi 0.00896 10 9 0.00064 9 B--doshiae 0.00410 9 B-grahamii 0.00660 12 7 0.00168 7 5 0.00176 5 B-berhoffi 0.00443 5 B-arupensi 0.00427 7 B-vinsonii 0.00509 4 3 0.00323 3 B-bacillif 0.01056 3 2 0.00162 2 1 0.01074 1 B-spp-Deer 0.00747 1 B--weissii 0.00523 2 B-clarridg 0.01371 4 A-tumefaci 0.10198 Data set # 3: Neighbor-joining method Negative branch lengths allowed +B-bacillif +--2 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! ! +B-elizabet ! +--7 +--4 ! +B-grahamii ! ! ! ! ! +-10 +B-birtlesi ! ! ! ! +-11 ! ! ! ! ! +B--doshiae ! ! ! +-12 ! ! ! ! +B-vinsonii ! +--9 +--6 ! ! ! +B-arupensi ! ! +--5 ! ! +B-berhoffi ! ! ! ! +B-quintana ! +--8 ! +B-henselae ! --3B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00172 4 2 0.00376 2 B-bacillif 0.01103 2 1 0.00852 1 B-spp-Deer 0.00796 1 B--weissii 0.00474 4 9 0.00692 9 10 0.00065 10 7 0.00176 7 B-elizabet 0.00941 7 B-grahamii 0.00759 10 12 0.00023 12 11 0.00013 11 B-birtlesi 0.00736 11 B--doshiae 0.00534 12 6 0.00270 6 B-vinsonii 0.00410 6 5 0.00090 5 B-arupensi 0.00359 5 B-berhoffi 0.00411 9 8 0.00080 8 B-quintana 0.01271 8 B-henselae 0.00809 3 B-clarridg 0.01631 3 A-tumefaci 0.08789 Data set # 4: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! ! ! +B-bacillif ! ! ! ! +B-vinsonii ! ! +--7 ! ! ! ! +B-berhoffi --3--4 +--9 +--5 ! ! ! ! +B-arupensi ! ! ! ! ! ! +-10 +B-elizabet ! ! ! ! ! ! ! ! +B-birtlesi ! ! ! +-12 ! +--8 ! +B--doshiae ! ! +-11 ! ! +B-grahamii ! ! ! ! +B-quintana ! +--6 ! +B-henselae ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.01571 3 4 0.00148 4 2 0.00170 2 1 0.00796 1 B--weissii 0.00506 1 B-spp-Deer 0.00764 2 B-bacillif 0.01399 4 8 0.00618 8 10 0.00147 10 9 0.00128 9 7 0.00149 7 B-vinsonii 0.00396 7 5 0.00284 5 B-berhoffi 0.00226 5 B-arupensi 0.00394 9 B-elizabet 0.01166 10 12 0.00086 12 B-birtlesi 0.00701 12 11 0.00029 11 B--doshiae 0.00534 11 B-grahamii 0.00566 8 6 0.00187 6 B-quintana 0.01166 6 B-henselae 0.00594 3 A-tumefaci 0.08839 Data set # 5: Neighbor-joining method Negative branch lengths allowed +B-quintana +--5 ! +B-henselae ! ! +B-arupensi +--8 +--6 ! ! +--9 +B-berhoffi ! ! ! ! ! ! ! +B-vinsonii ! +-11 ! ! +B-birtlesi ! ! +-10 ! ! ! ! +B-grahamii ! +-12 +--7 ! ! +B-elizabet ! ! ! +B--doshiae ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 8 0.00684 8 5 0.00243 5 B-quintana 0.01081 5 B-henselae 0.00559 8 11 0.00101 11 9 0.00108 9 6 0.00174 6 B-arupensi 0.00298 6 B-berhoffi 0.00402 9 B-vinsonii 0.00461 11 12 0.00066 12 10 0.00068 10 B-birtlesi 0.00764 10 7 0.00086 7 B-grahamii 0.00893 7 B-elizabet 0.00847 12 B--doshiae 0.00407 4 3 0.00404 3 2 0.00103 2 1 0.00946 1 B--weissii 0.00622 1 B-spp-Deer 0.00668 2 B-clarridg 0.01479 3 B-bacillif 0.01180 4 A-tumefaci 0.09591 Data set # 6: Neighbor-joining method Negative branch lengths allowed +B-henselae +--5 ! +B-quintana ! ! +B-vinsonii +--9 +--7 ! ! ! ! +B-berhoffi ! ! +--8 +--6 ! ! ! ! +B-arupensi ! ! ! ! ! +-10 +B-elizabet ! ! ! ! +B--doshiae ! +-11 ! ! +B-birtlesi ! +-12 ! +B-grahamii ! ! +B-clarridg ! +--2 ! ! ! +B-spp-Deer --4--3 +--1 ! ! +B--weissii ! ! ! +B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00470 9 5 0.00227 5 B-henselae 0.00712 5 B-quintana 0.01318 9 10 0.00097 10 8 0.00115 8 7 0.00135 7 B-vinsonii 0.00416 7 6 0.00094 6 B-berhoffi 0.00335 6 B-arupensi 0.00215 8 B-elizabet 0.00950 10 11 0.00079 11 B--doshiae 0.00520 11 12 0.00030 12 B-birtlesi 0.00671 12 B-grahamii 0.00769 4 3 0.00135 3 2 0.00027 2 B-clarridg 0.01444 2 1 0.00586 1 B-spp-Deer 0.00806 1 B--weissii 0.00464 3 B-bacillif 0.01300 4 A-tumefaci 0.08573 Data set # 7: Neighbor-joining method Negative branch lengths allowed +B--weissii +--1 +--2 +B-spp-Deer ! ! ! +B-bacillif ! +--4 +B--doshiae ! ! +--9 ! ! ! +B-birtlesi ! ! ! ! ! ! +B-berhoffi ! +-10 +--8 ! ! ! ! +B-arupensi ! ! ! +--6 ! ! ! +B-vinsonii ! +-12 ! ! +B-henselae ! ! +--5 ! ! ! +B-quintana ! +-11 ! ! +B-grahamii ! +--7 ! +B-elizabet ! --3B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00187 4 2 0.00223 2 1 0.00882 1 B--weissii 0.00482 1 B-spp-Deer 0.00668 2 B-bacillif 0.00988 4 10 0.00622 10 9 0.00040 9 B--doshiae 0.00333 9 B-birtlesi 0.00537 10 12 0.00059 12 8 0.00108 8 B-berhoffi 0.00481 8 6 0.00054 6 B-arupensi 0.00360 6 B-vinsonii 0.00390 12 11 0.00027 11 5 0.00276 5 B-henselae 0.00589 5 B-quintana 0.01061 11 7 0.00094 7 B-grahamii 0.00549 7 B-elizabet 0.01031 3 B-clarridg 0.01450 3 A-tumefaci 0.07950 Data set # 8: Neighbor-joining method Negative branch lengths allowed +B-henselae +--7 ! +B-quintana ! ! +B-birtlesi +-11 +--9 ! ! ! +B--doshiae ! ! +-10 ! ! ! ! +B-grahamii ! ! ! +--8 ! +-12 +B-elizabet ! ! ! ! +B-berhoffi ! ! +--5 ! +--6 +B-arupensi ! ! ! +B-vinsonii ! ! +B-bacillif ! +--2 ! ! ! +B-spp-Deer --4--3 +--1 ! ! +B--weissii ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 11 0.00581 11 7 0.00120 7 B-henselae 0.00708 7 B-quintana 0.01242 11 12 0.00045 12 10 0.00068 10 9 0.00060 9 B-birtlesi 0.00592 9 B--doshiae 0.00278 10 8 0.00130 8 B-grahamii 0.00547 8 B-elizabet 0.00973 12 6 0.00223 6 5 0.00244 5 B-berhoffi 0.00205 5 B-arupensi 0.00165 6 B-vinsonii 0.00336 4 3 0.00296 3 2 0.00156 2 B-bacillif 0.01087 2 1 0.00823 1 B-spp-Deer 0.00591 1 B--weissii 0.00379 3 B-clarridg 0.01812 4 A-tumefaci 0.09132 Data set # 9: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-arupensi +--5 +--7 ! ! +--8 +B-vinsonii ! ! ! ! ! ! ! +B-berhoffi ! +--9 ! ! +B-henselae ! ! ! ! +-10 +B-birtlesi +--4 ! +-12 ! ! ! ! +B--doshiae ! ! +-11 ! ! ! +B-grahamii ! ! +--6 ! ! +B-elizabet ! ! ! ! +B-clarridg ! +--3 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! --2B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00195 4 5 0.00483 5 B-quintana 0.01031 5 9 0.00278 9 8 0.00133 8 7 0.00093 7 B-arupensi 0.00385 7 B-vinsonii 0.00585 8 B-berhoffi 0.00797 9 10 0.00021 10 B-henselae 0.00766 10 11 0.00074 11 12 0.00014 12 B-birtlesi 0.00761 12 B--doshiae 0.00379 11 6 0.00186 6 B-grahamii 0.00864 6 B-elizabet 0.00956 4 3 0.00036 3 B-clarridg 0.01280 3 1 0.00985 1 B-spp-Deer 0.00671 1 B--weissii 0.00349 2 B-bacillif 0.01100 2 A-tumefaci 0.09120 Data set # 10: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! ! ! +B-bacillif ! ! --3--4 +B-henselae ! ! +--6 ! ! ! +B-quintana ! ! ! ! +--8 +B-grahamii ! ! +--5 ! ! ! +B-elizabet ! ! ! ! +--9 +B-arupensi ! ! +--7 ! ! +-10 +B-berhoffi ! ! ! ! ! +-11 +B-vinsonii ! ! ! ! +B-birtlesi ! +-12 ! +B--doshiae ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.01548 3 4 0.00095 4 2 0.00210 2 1 0.00662 1 B-spp-Deer 0.00812 1 B--weissii 0.00658 2 B-bacillif 0.01493 4 8 0.00823 8 6 0.00234 6 B-henselae 0.00729 6 B-quintana 0.01351 8 9 0.00069 9 5 0.00286 5 B-grahamii 0.00785 5 B-elizabet 0.01065 9 11 0.00099 11 10 0.00095 10 7 0.00140 7 B-arupensi 0.00410 7 B-berhoffi 0.00440 10 B-vinsonii 0.00420 11 12 0.00056 12 B-birtlesi 0.00683 12 B--doshiae 0.00507 3 A-tumefaci 0.09502 Data set # 11: Neighbor-joining method Negative branch lengths allowed +B-quintana ! +--6 +B-henselae ! ! ! ! ! ! +B--doshiae ! +--9 +-10 ! ! ! ! +B-elizabet ! ! ! +--7 ! +-11 +B-grahamii ! ! ! ! +B-birtlesi ! ! ! ! +-12 +B-berhoffi ! ! +--5 ! +--8 +B-arupensi ! ! ! +B-vinsonii ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 6 0.00501 6 B-quintana 0.01320 6 9 0.00255 9 B-henselae 0.00751 9 11 0.00087 11 10 0.00065 10 B--doshiae 0.00501 10 7 0.00169 7 B-elizabet 0.00952 7 B-grahamii 0.00648 11 12 0.00040 12 B-birtlesi 0.00744 12 8 0.00133 8 5 0.00225 5 B-berhoffi 0.00361 5 B-arupensi 0.00289 8 B-vinsonii 0.00435 4 3 0.00097 3 2 0.00310 2 1 0.00843 1 B--weissii 0.00351 1 B-spp-Deer 0.00739 2 B-bacillif 0.01232 3 B-clarridg 0.01362 4 A-tumefaci 0.09338 Data set # 12: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! ! ! +B-bacillif ! ! ! ! +B-quintana --3--4 ! ! ! ! +B-vinsonii ! ! ! +--6 ! ! ! ! ! +B-arupensi ! ! ! ! +--5 ! +--7 +-10 +B-berhoffi ! ! ! ! ! ! ! ! +B-grahamii ! ! +-12 +--8 ! ! ! ! +B-elizabet ! ! ! ! ! +-11 ! +B--doshiae ! ! +--9 ! ! +B-birtlesi ! ! ! +B-henselae ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.01468 3 4 0.00162 4 2 0.00296 2 1 0.00910 1 B-spp-Deer 0.00861 1 B--weissii 0.00309 2 B-bacillif 0.00735 4 7 0.00486 7 B-quintana 0.01019 7 11 0.00158 11 12 0.00027 12 10 0.00039 10 6 0.00229 6 B-vinsonii 0.00429 6 5 0.00166 5 B-arupensi 0.00318 5 B-berhoffi 0.00252 10 8 0.00154 8 B-grahamii 0.00659 8 B-elizabet 0.00991 12 9 0.00068 9 B--doshiae 0.00664 9 B-birtlesi 0.00856 11 B-henselae 0.00596 3 A-tumefaci 0.09112 Data set # 13: Neighbor-joining method Negative branch lengths allowed +B-quintana +--6 ! +B-henselae ! ! +B--doshiae +--9 +-10 ! ! ! +B-birtlesi ! ! +-11 ! ! ! ! +B-grahamii ! ! ! +--7 ! +-12 +B-elizabet ! ! +--4 ! +B-berhoffi ! ! ! +--5 ! ! +--8 +B-arupensi ! ! ! ! ! +B-vinsonii ! ! ! ! +B-spp-Deer ! ! +--1 ! +--3 +B--weissii ! ! ! +B-bacillif ! --2B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00248 4 9 0.00579 9 6 0.00135 6 B-quintana 0.01130 6 B-henselae 0.00660 9 12 0.00104 12 11 0.00034 11 10 0.00036 10 B--doshiae 0.00510 10 B-birtlesi 0.00780 11 7 0.00187 7 B-grahamii 0.00753 7 B-elizabet 0.01117 12 8 0.00186 8 5 0.00094 5 B-berhoffi 0.00337 5 B-arupensi 0.00453 8 B-vinsonii 0.00426 4 3 0.00091 3 1 0.00862 1 B-spp-Deer 0.00800 1 B--weissii 0.00270 3 B-bacillif 0.01048 2 B-clarridg 0.01670 2 A-tumefaci 0.08470 Data set # 14: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! +--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-bacillif ! ! +B-henselae ! +--5 ! ! +B-quintana ! ! ! ! +B--doshiae --4-10 +--8 ! ! ! +B-birtlesi ! ! +-12 ! ! ! ! +B-grahamii ! ! ! +--7 ! +-11 +B-elizabet ! ! ! ! +B-berhoffi ! ! +--6 ! +--9 +B-arupensi ! ! ! +B-vinsonii ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00175 3 B-clarridg 0.01365 3 2 0.00138 2 1 0.00724 1 B-spp-Deer 0.00757 1 B--weissii 0.00543 2 B-bacillif 0.00971 4 10 0.00415 10 5 0.00287 5 B-henselae 0.00559 5 B-quintana 0.01071 10 11 0.00067 11 12 0.00030 12 8 0.00068 8 B--doshiae 0.00463 8 B-birtlesi 0.00807 12 7 0.00208 7 B-grahamii 0.00568 7 B-elizabet 0.01162 11 9 0.00084 9 6 0.00254 6 B-berhoffi 0.00235 6 B-arupensi 0.00165 9 B-vinsonii 0.00431 4 A-tumefaci 0.07818 Data set # 15: Neighbor-joining method Negative branch lengths allowed +B-clarridg +--2 ! ! +B--weissii +--3 +--1 ! ! +B-spp-Deer ! ! ! +B-bacillif ! ! +B-quintana ! ! ! ! +B-vinsonii ! ! ! ! ! ! +B-grahamii --4--6 +-12 +--8 ! ! ! ! ! +B-elizabet ! ! ! ! +-10 ! ! ! ! ! ! +B-birtlesi ! ! ! +-11 +--9 ! +--7 ! +B--doshiae ! ! ! ! ! +B-henselae ! ! ! ! +B-arupensi ! +--5 ! +B-berhoffi ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00139 3 2 0.00140 2 B-clarridg 0.01302 2 1 0.00813 1 B--weissii 0.00420 1 B-spp-Deer 0.00670 3 B-bacillif 0.01170 4 6 0.00635 6 B-quintana 0.01351 6 7 0.00117 7 12 0.00091 12 B-vinsonii 0.00422 12 11 0.00033 11 10 0.00054 10 8 0.00094 8 B-grahamii 0.00690 8 B-elizabet 0.00880 10 9 0.00046 9 B-birtlesi 0.00714 9 B--doshiae 0.00306 11 B-henselae 0.00819 7 5 0.00207 5 B-arupensi 0.00438 5 B-berhoffi 0.00312 4 A-tumefaci 0.08878 Data set # 16: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-quintana ! ! ! +--6 +B-henselae ! ! ! ! ! ! ! ! +B-arupensi ! ! +-12 +--5 ! ! ! +--7 +B-berhoffi ! ! ! ! ! ! ! ! ! +B-vinsonii ! ! +-11 ! ! ! +B--doshiae --3--4 ! +--9 ! ! ! ! +B-birtlesi ! ! +-10 ! ! ! +B-elizabet ! ! +--8 ! ! +B-grahamii ! ! ! ! +B--weissii ! ! +--1 ! +--2 +B-spp-Deer ! ! ! +B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.01602 3 4 0.00182 4 6 0.00555 6 B-quintana 0.01239 6 12 0.00151 12 B-henselae 0.00920 12 11 0.00055 11 7 0.00136 7 5 0.00234 5 B-arupensi 0.00369 5 B-berhoffi 0.00501 7 B-vinsonii 0.00536 11 10 0.00106 10 9 0.00098 9 B--doshiae 0.00380 9 B-birtlesi 0.00740 10 8 0.00122 8 B-elizabet 0.01069 8 B-grahamii 0.00621 4 2 0.00197 2 1 0.00800 1 B--weissii 0.00403 1 B-spp-Deer 0.00717 2 B-bacillif 0.01240 3 A-tumefaci 0.08298 Data set # 17: Neighbor-joining method Negative branch lengths allowed +B-berhoffi +--6 +--8 +B-arupensi ! ! ! +B-vinsonii +-10 ! ! +B-henselae ! ! +--5 ! ! ! +B-quintana ! +--9 +-12 ! +B-grahamii ! ! +--7 ! ! +B-elizabet ! ! ! ! +B--doshiae ! +-11 ! +B-birtlesi ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 12 0.00509 12 10 0.00059 10 8 0.00163 8 6 0.00107 6 B-berhoffi 0.00531 6 B-arupensi 0.00369 8 B-vinsonii 0.00543 10 9 0.00041 9 5 0.00392 5 B-henselae 0.00556 5 B-quintana 0.00994 9 7 0.00168 7 B-grahamii 0.00591 7 B-elizabet 0.01039 12 11 0.00022 11 B--doshiae 0.00549 11 B-birtlesi 0.00851 4 3 0.00133 3 2 0.00145 2 1 0.00697 1 B--weissii 0.00388 1 B-spp-Deer 0.00832 2 B-clarridg 0.01342 3 B-bacillif 0.01468 4 A-tumefaci 0.09572 Data set # 18: Neighbor-joining method Negative branch lengths allowed +B-henselae +--6 ! +B-quintana ! ! +B-berhoffi ! +--5 +--8 +--7 +B-arupensi ! ! ! ! ! ! +-10 +B-vinsonii ! ! ! ! ! ! ! ! +B-grahamii ! ! ! +-11 ! +--9 ! +B-birtlesi ! ! +-12 ! ! +B--doshiae ! ! ! +B-elizabet ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 8 0.00692 8 6 0.00186 6 B-henselae 0.00617 6 B-quintana 0.01133 8 9 0.00061 9 10 0.00054 10 7 0.00111 7 5 0.00241 5 B-berhoffi 0.00435 5 B-arupensi 0.00365 7 B-vinsonii 0.00669 10 11 0.00109 11 B-grahamii 0.00514 11 12 0.00031 12 B-birtlesi 0.00518 12 B--doshiae 0.00382 9 B-elizabet 0.00794 4 3 0.00336 3 2 0.00124 2 1 0.00851 1 B-spp-Deer 0.00705 1 B--weissii 0.00435 2 B-clarridg 0.01304 3 B-bacillif 0.01296 4 A-tumefaci 0.09404 Data set # 19: Neighbor-joining method Negative branch lengths allowed +B-birtlesi +--9 ! +B--doshiae ! +-12 +B-berhoffi ! ! +--6 ! ! ! +B-arupensi ! ! ! ! +-11 +B-vinsonii ! ! +--8 ! ! ! ! +B-quintana ! ! ! +--5 ! +-10 +B-henselae ! ! ! ! +B-grahamii ! +--7 ! +B-elizabet ! ! +B-clarridg --4--3 ! ! +B-bacillif ! +--2 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 12 0.00559 12 9 0.00033 9 B-birtlesi 0.00733 9 B--doshiae 0.00407 12 11 0.00021 11 6 0.00185 6 B-berhoffi 0.00275 6 B-arupensi 0.00345 11 10 0.00025 10 8 0.00075 8 B-vinsonii 0.00359 8 5 0.00201 5 B-quintana 0.01062 5 B-henselae 0.00718 10 7 0.00163 7 B-grahamii 0.00513 7 B-elizabet 0.01087 4 3 0.00273 3 B-clarridg 0.01638 3 2 0.00177 2 B-bacillif 0.01140 2 1 0.00795 1 B-spp-Deer 0.00896 1 B--weissii 0.00424 4 A-tumefaci 0.09535 Data set # 20: Neighbor-joining method Negative branch lengths allowed +B-birtlesi +--9 ! ! +B-vinsonii ! +--7 ! ! +B-arupensi +-10 +--6 ! ! +B-berhoffi ! ! ! ! +B--doshiae +-11 +--8 ! ! +B-grahamii ! ! ! ! +B-quintana ! ! +--5 ! +-12 +B-henselae ! ! ! +B-elizabet ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 11 0.00665 11 10 0.00070 10 9 0.00051 9 B-birtlesi 0.00789 9 7 0.00196 7 B-vinsonii 0.00353 7 6 0.00072 6 B-arupensi 0.00305 6 B-berhoffi 0.00265 10 8 0.00115 8 B--doshiae 0.00622 8 B-grahamii 0.00748 11 12 0.00038 12 5 0.00246 5 B-quintana 0.01187 5 B-henselae 0.00663 12 B-elizabet 0.00959 4 3 0.00122 3 2 0.00172 2 1 0.00870 1 B--weissii 0.00498 1 B-spp-Deer 0.00822 2 B-clarridg 0.01510 3 B-bacillif 0.01273 4 A-tumefaci 0.09370 Data set # 21: Neighbor-joining method Negative branch lengths allowed +B-bacillif ! ! +B-birtlesi +--4 +--9 ! ! ! +B--doshiae ! ! ! ! ! ! +B-quintana ! +-10 +--5 ! ! +--8 +B-henselae ! ! ! ! ! ! ! +B-vinsonii ! +-12 ! ! +B-grahamii ! ! +--6 ! ! ! +B-elizabet ! +-11 ! ! +B-berhoffi ! +--7 ! +B-arupensi ! ! +B--weissii ! +--1 --3--2 +B-spp-Deer ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00159 4 B-bacillif 0.01468 4 10 0.00594 10 9 0.00077 9 B-birtlesi 0.00764 9 B--doshiae 0.00586 10 12 0.00050 12 8 0.00162 8 5 0.00215 5 B-quintana 0.01302 5 B-henselae 0.00498 8 B-vinsonii 0.00525 12 11 0.00022 11 6 0.00287 6 B-grahamii 0.00758 6 B-elizabet 0.00942 11 7 0.00218 7 B-berhoffi 0.00402 7 B-arupensi 0.00448 3 2 0.00203 2 1 0.00696 1 B--weissii 0.00421 1 B-spp-Deer 0.01049 2 B-clarridg 0.01779 3 A-tumefaci 0.09159 Data set # 22: Neighbor-joining method Negative branch lengths allowed +B-spp-Deer +--1 +--2 +B--weissii ! ! ! +B-bacillif +--4 ! ! +B-quintana ! ! ! ! ! ! +B-henselae ! +--6 ! ! ! ! +B--doshiae ! ! ! ! ! +--8 +-11 +B-grahamii ! ! ! ! +--9 ! ! ! +-12 +B-elizabet ! ! ! ! ! +-10 +B-birtlesi ! ! ! ! +B-arupensi ! ! +--5 ! +--7 +B-berhoffi ! ! ! +B-vinsonii ! --3B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00081 4 2 0.00294 2 1 0.00791 1 B-spp-Deer 0.00579 1 B--weissii 0.00341 2 B-bacillif 0.01084 4 6 0.00598 6 B-quintana 0.01056 6 8 0.00199 8 B-henselae 0.00649 8 10 0.00110 10 11 0.00071 11 B--doshiae 0.00380 11 12 0.00043 12 9 0.00119 9 B-grahamii 0.00480 9 B-elizabet 0.00790 12 B-birtlesi 0.00871 10 7 0.00130 7 5 0.00272 5 B-arupensi 0.00305 5 B-berhoffi 0.00215 7 B-vinsonii 0.00388 3 B-clarridg 0.01523 3 A-tumefaci 0.08877 Data set # 23: Neighbor-joining method Negative branch lengths allowed +B-elizabet ! ! +B-henselae ! +--8 +--9 ! ! +B-quintana ! ! ! +--7 ! ! ! ! +B-vinsonii ! ! ! +--6 ! +-11 ! +B-arupensi ! ! +--5 ! ! +B-berhoffi ! ! ! ! +B-grahamii ! +-12 ! ! +B-birtlesi ! +-10 ! +B--doshiae ! ! +B-bacillif ! ! --4--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00485 9 B-elizabet 0.00998 9 11 0.00039 11 8 0.00056 8 B-henselae 0.00775 8 7 0.00055 7 B-quintana 0.01060 7 6 0.00107 6 B-vinsonii 0.00283 6 5 0.00077 5 B-arupensi 0.00305 5 B-berhoffi 0.00345 11 12 0.00031 12 B-grahamii 0.00666 12 10 0.00039 10 B-birtlesi 0.00873 10 B--doshiae 0.00427 4 3 0.00097 3 B-bacillif 0.01088 3 2 0.00237 2 1 0.00676 1 B-spp-Deer 0.00757 1 B--weissii 0.00263 2 B-clarridg 0.01219 4 A-tumefaci 0.08687 Data set # 24: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-bacillif ! ! ! ! +B-quintana ! ! ! ! ! ! +B-vinsonii ! ! +--6 +--9 --2--3 ! ! ! +B-birtlesi ! ! ! ! ! ! ! ! +-11 +B-arupensi ! ! ! ! +--5 ! ! ! ! ! +B-berhoffi ! ! ! ! ! ! ! ! +-12 +B--doshiae ! +--4 ! +--7 ! ! ! ! +B-grahamii ! ! +-10 ! ! ! +B-elizabet ! ! +--8 ! ! +B-henselae ! ! ! ! +B--weissii ! +--1 ! +B-spp-Deer ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 B-clarridg 0.01484 2 3 0.00108 3 B-bacillif 0.01187 3 4 0.00048 4 6 0.00680 6 B-quintana 0.01155 6 11 0.00181 11 9 0.00082 9 B-vinsonii 0.00723 9 B-birtlesi 0.00677 11 12 0.00017 12 5 0.00233 5 B-arupensi 0.00282 5 B-berhoffi 0.00388 12 10 0.00056 10 7 0.00117 7 B--doshiae 0.00541 7 B-grahamii 0.00779 10 8 0.00110 8 B-elizabet 0.00763 8 B-henselae 0.00537 4 1 0.00865 1 B--weissii 0.00507 1 B-spp-Deer 0.00663 2 A-tumefaci 0.09486 Data set # 25: Neighbor-joining method Negative branch lengths allowed +B-birtlesi ! ! +B-quintana ! +--5 ! ! +B-henselae +--9 +-10 ! ! ! ! +B-berhoffi ! ! ! ! +--6 ! ! +-12 +--8 +B-arupensi ! ! ! ! ! ! ! ! ! +B-vinsonii ! +-11 ! ! ! +B--doshiae ! ! ! ! +B-grahamii ! +--7 ! +B-elizabet ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00408 9 B-birtlesi 0.00834 9 11 0.00070 11 12 0.00024 12 10 0.00028 10 5 0.00361 5 B-quintana 0.01238 5 B-henselae 0.00662 10 8 0.00099 8 6 0.00157 6 B-berhoffi 0.00298 6 B-arupensi 0.00422 8 B-vinsonii 0.00673 12 B--doshiae 0.00430 11 7 0.00129 7 B-grahamii 0.00585 7 B-elizabet 0.01395 4 3 0.00190 3 2 0.00286 2 1 0.00833 1 B-spp-Deer 0.00694 1 B--weissii 0.00326 2 B-bacillif 0.00917 3 B-clarridg 0.01464 4 A-tumefaci 0.08600 Data set # 26: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-henselae +--4 +--5 ! ! ! +B-quintana ! ! ! ! +--8 +B-vinsonii ! ! +--9 ! ! ! ! +B-berhoffi ! ! ! +--6 ! +-11 +B-arupensi ! ! ! ! +B--doshiae ! ! ! ! +-12 +B-elizabet ! ! +--7 ! +-10 +B-grahamii ! ! ! +B-birtlesi ! ! +B-spp-Deer ! +--1 --3--2 +B--weissii ! ! ! +B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00067 4 B-clarridg 0.01369 4 8 0.00482 8 5 0.00263 5 B-henselae 0.00703 5 B-quintana 0.00997 8 11 0.00130 11 9 0.00132 9 B-vinsonii 0.00521 9 6 0.00219 6 B-berhoffi 0.00443 6 B-arupensi 0.00477 11 12 0.00038 12 B--doshiae 0.00465 12 10 0.00040 10 7 0.00230 7 B-elizabet 0.01067 7 B-grahamii 0.00433 10 B-birtlesi 0.00745 3 2 0.00136 2 1 0.00692 1 B-spp-Deer 0.00717 1 B--weissii 0.00223 2 B-bacillif 0.01098 3 A-tumefaci 0.08939 Data set # 27: Neighbor-joining method Negative branch lengths allowed +B-elizabet ! ! +B-henselae +--7 +--5 ! ! ! +B-quintana ! ! ! ! +--8 +B--doshiae ! ! +-12 ! ! ! ! +B-birtlesi ! ! ! +-11 ! +-10 +B-vinsonii ! ! ! ! +B-arupensi ! ! +--6 ! +--9 +B-berhoffi ! ! ! +B-grahamii ! ! +B-bacillif ! ! --4--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 7 0.00495 7 B-elizabet 0.01059 7 8 0.00006 8 5 0.00164 5 B-henselae 0.00540 5 B-quintana 0.00910 8 10 0.00150 10 12 0.00028 12 B--doshiae 0.00460 12 11 0.00010 11 B-birtlesi 0.00817 11 B-vinsonii 0.00353 10 9 0.00061 9 6 0.00141 6 B-arupensi 0.00324 6 B-berhoffi 0.00496 9 B-grahamii 0.00489 4 3 0.00188 3 B-bacillif 0.01066 3 2 0.00044 2 1 0.00909 1 B-spp-Deer 0.00697 1 B--weissii 0.00343 2 B-clarridg 0.01311 4 A-tumefaci 0.08803 Data set # 28: Neighbor-joining method Negative branch lengths allowed +B-birtlesi ! ! +B-arupensi ! +--6 ! ! +B-berhoffi ! +--9 +-11 ! ! +B-elizabet ! ! ! +--8 ! ! +-10 +B-grahamii ! ! ! ! ! ! ! ! +B-quintana ! ! ! ! +--5 ! +-12 +--7 +B-henselae ! ! ! ! ! +B-vinsonii ! ! ! +B--doshiae ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 11 0.00472 11 B-birtlesi 0.00961 11 12 0.00020 12 10 0.00048 10 9 0.00016 9 6 0.00230 6 B-arupensi 0.00401 6 B-berhoffi 0.00399 9 8 0.00107 8 B-elizabet 0.01124 8 B-grahamii 0.00675 10 7 0.00127 7 5 0.00256 5 B-quintana 0.01017 5 B-henselae 0.00553 7 B-vinsonii 0.00454 12 B--doshiae 0.00583 4 3 0.00201 3 2 0.00117 2 1 0.01149 1 B--weissii 0.00327 1 B-spp-Deer 0.00763 2 B-clarridg 0.01551 3 B-bacillif 0.01133 4 A-tumefaci 0.09532 Data set # 29: Neighbor-joining method Negative branch lengths allowed +B-quintana ! +--5 +B-henselae ! ! ! ! +--7 +B-elizabet ! ! ! ! ! ! +B-berhoffi ! +-12 +--6 ! ! +--8 +B-arupensi ! ! ! ! ! +-11 +B-vinsonii +--4 ! ! ! ! +B-birtlesi ! ! +-10 ! ! ! +B--doshiae ! ! +--9 ! ! +B-grahamii ! ! ! ! +B--weissii ! ! +--1 ! +--2 +B-spp-Deer ! ! ! +B-bacillif ! --3B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00121 4 5 0.00630 5 B-quintana 0.01249 5 7 0.00197 7 B-henselae 0.00707 7 12 0.00145 12 B-elizabet 0.01029 12 11 0.00042 11 8 0.00089 8 6 0.00164 6 B-berhoffi 0.00396 6 B-arupensi 0.00304 8 B-vinsonii 0.00436 11 10 0.00108 10 B-birtlesi 0.00661 10 9 0.00039 9 B--doshiae 0.00393 9 B-grahamii 0.00607 4 2 0.00204 2 1 0.00635 1 B--weissii 0.00344 1 B-spp-Deer 0.00856 2 B-bacillif 0.00935 3 B-clarridg 0.01584 3 A-tumefaci 0.08486 Data set # 30: Neighbor-joining method Negative branch lengths allowed +B-henselae +--5 ! +B-quintana ! ! +B-elizabet +--9 +--8 ! ! ! +B-grahamii ! ! +-12 ! ! ! ! +B-birtlesi ! ! ! +-10 ! +-11 +B--doshiae ! ! ! ! +B-vinsonii ! +--7 ! ! +B-berhoffi ! +--6 ! +B-arupensi ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00431 9 5 0.00290 5 B-henselae 0.00696 5 B-quintana 0.01284 9 11 0.00091 11 12 0.00026 12 8 0.00123 8 B-elizabet 0.01059 8 B-grahamii 0.00511 12 10 0.00062 10 B-birtlesi 0.00666 10 B--doshiae 0.00484 11 7 0.00197 7 B-vinsonii 0.00342 7 6 0.00083 6 B-berhoffi 0.00459 6 B-arupensi 0.00461 4 3 0.00188 3 2 0.00096 2 1 0.00981 1 B--weissii 0.00308 1 B-spp-Deer 0.00562 2 B-bacillif 0.01019 3 B-clarridg 0.01863 4 A-tumefaci 0.08961 Data set # 31: Neighbor-joining method Negative branch lengths allowed +B-arupensi +--5 +--8 +B-berhoffi ! ! +--9 +B-vinsonii ! ! ! ! +B-henselae +-11 +--6 ! ! +B-quintana ! ! +-12 ! +B-grahamii ! ! +--7 ! ! +B-elizabet +-10 ! ! ! +B--doshiae ! ! ! +B-birtlesi ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 10 0.00646 10 12 0.00056 12 11 0.00038 11 9 0.00093 9 8 0.00099 8 5 0.00233 5 B-arupensi 0.00346 5 B-berhoffi 0.00404 8 B-vinsonii 0.00637 9 6 0.00246 6 B-henselae 0.00504 6 B-quintana 0.00996 11 7 0.00222 7 B-grahamii 0.00534 7 B-elizabet 0.00886 12 B--doshiae 0.00638 10 B-birtlesi 0.00825 4 3 0.00207 3 2 0.00124 2 1 0.01063 1 B--weissii 0.00359 1 B-spp-Deer 0.00581 2 B-bacillif 0.01307 3 B-clarridg 0.01516 4 A-tumefaci 0.09033 Data set # 32: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-vinsonii ! +--7 ! ! ! +B-arupensi +--6 ! +--5 ! ! ! +B-berhoffi ! ! +-11 ! ! ! ! +B-birtlesi ! ! ! ! +-10 ! ! ! ! ! +B--doshiae ! +--8 +-12 +--4 ! ! +B-grahamii ! ! ! +--9 ! ! ! +B-elizabet ! ! ! ! ! +B-henselae ! ! ! ! +B--weissii ! ! +--1 ! +--3 +B-spp-Deer ! ! ! +B-clarridg ! --2B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00203 4 6 0.00536 6 B-quintana 0.01280 6 8 0.00227 8 11 0.00136 11 7 0.00148 7 B-vinsonii 0.00488 7 5 0.00252 5 B-arupensi 0.00336 5 B-berhoffi 0.00284 11 12 0.00025 12 10 0.00091 10 B-birtlesi 0.00928 10 B--doshiae 0.00472 12 9 0.00092 9 B-grahamii 0.00637 9 B-elizabet 0.01213 8 B-henselae 0.00696 4 3 0.00077 3 1 0.00751 1 B--weissii 0.00386 1 B-spp-Deer 0.01034 3 B-clarridg 0.01639 2 B-bacillif 0.01341 2 A-tumefaci 0.09349 Data set # 33: Neighbor-joining method Negative branch lengths allowed +B-quintana +--5 ! +B-henselae ! +--8 +B-arupensi ! ! +--6 ! ! ! +B-berhoffi ! +--9 ! ! +B-vinsonii ! ! ! ! +-10 +B-elizabet +--4 ! +--7 ! ! ! ! +B-grahamii ! ! +-11 ! ! ! +B--doshiae ! ! +-12 ! ! +B-birtlesi ! ! ! ! +B-bacillif ! +--3 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! --2B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00309 4 8 0.00663 8 5 0.00185 5 B-quintana 0.01203 5 B-henselae 0.00727 8 9 0.00070 9 6 0.00219 6 B-arupensi 0.00362 6 B-berhoffi 0.00508 9 10 0.00034 10 B-vinsonii 0.00535 10 11 0.00075 11 7 0.00216 7 B-elizabet 0.00859 7 B-grahamii 0.00641 11 12 0.00007 12 B--doshiae 0.00459 12 B-birtlesi 0.00811 4 3 0.00201 3 B-bacillif 0.01107 3 1 0.01043 1 B-spp-Deer 0.00777 1 B--weissii 0.00463 2 B-clarridg 0.01429 2 A-tumefaci 0.09351 Data set # 34: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-berhoffi ! +--5 ! +--8 +B-arupensi ! ! ! +--7 ! +B-vinsonii ! ! ! ! ! +-12 +B-grahamii ! ! ! ! +--6 ! ! ! ! +--9 +B-elizabet ! ! ! ! ! ! ! +-10 +-11 +B-birtlesi ! ! ! ! ! +B--doshiae ! ! ! +B-henselae ! ! +B-bacillif ! +--2 ! ! ! +B--weissii --4--3 +--1 ! ! +B-spp-Deer ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 7 0.00379 7 B-quintana 0.01224 7 10 0.00193 10 12 0.00073 12 8 0.00194 8 5 0.00185 5 B-berhoffi 0.00501 5 B-arupensi 0.00449 8 B-vinsonii 0.00440 12 11 0.00048 11 9 0.00151 9 6 0.00155 6 B-grahamii 0.00788 6 B-elizabet 0.00912 9 B-birtlesi 0.00760 11 B--doshiae 0.00581 10 B-henselae 0.00916 4 3 0.00165 3 2 0.00175 2 B-bacillif 0.01276 2 1 0.00974 1 B--weissii 0.00370 1 B-spp-Deer 0.00680 3 B-clarridg 0.01675 4 A-tumefaci 0.08815 Data set # 35: Neighbor-joining method Negative branch lengths allowed +B-elizabet ! ! +B-berhoffi ! +--5 ! +--7 +B-arupensi +-10 ! ! ! ! +-12 +B-vinsonii ! ! ! ! ! ! ! ! +B-quintana ! ! ! +--6 ! +-11 +B-henselae ! ! ! ! +B-birtlesi ! ! +--8 ! +--9 +B-grahamii ! ! ! +B--doshiae ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 10 0.00637 10 B-elizabet 0.01295 10 11 0.00038 11 12 0.00028 12 7 0.00191 7 5 0.00268 5 B-berhoffi 0.00289 5 B-arupensi 0.00311 7 B-vinsonii 0.00632 12 6 0.00256 6 B-quintana 0.01121 6 B-henselae 0.00609 11 9 0.00202 9 8 0.00065 8 B-birtlesi 0.00682 8 B-grahamii 0.00838 9 B--doshiae 0.00375 4 3 0.00087 3 2 0.00244 2 1 0.00961 1 B-spp-Deer 0.00572 1 B--weissii 0.00348 2 B-bacillif 0.01109 3 B-clarridg 0.01506 4 A-tumefaci 0.09041 Data set # 36: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-henselae ! +--5 ! ! +B-quintana ! ! ! +--9 +B-birtlesi ! ! ! +-10 ! ! ! ! +B--doshiae ! ! ! ! ! ! +-11 +B-grahamii ! ! ! +--8 ! ! ! ! +B-elizabet --3--4 +-12 ! ! ! +B-berhoffi ! ! ! +--6 ! ! +--7 +B-arupensi ! ! ! ! ! +B-vinsonii ! ! ! ! +B-bacillif ! +--2 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.01584 3 4 0.00149 4 9 0.00500 9 5 0.00267 5 B-henselae 0.00467 5 B-quintana 0.00933 9 11 0.00071 11 10 0.00058 10 B-birtlesi 0.00610 10 B--doshiae 0.00480 11 12 0.00010 12 8 0.00117 8 B-grahamii 0.00601 8 B-elizabet 0.01069 12 7 0.00131 7 6 0.00164 6 B-berhoffi 0.00344 6 B-arupensi 0.00306 7 B-vinsonii 0.00256 4 2 0.00421 2 B-bacillif 0.00850 2 1 0.00580 1 B-spp-Deer 0.00521 1 B--weissii 0.00449 3 A-tumefaci 0.09896 Data set # 37: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-birtlesi ! +-10 ! ! ! +B-grahamii +--7 ! +--8 ! ! +-11 +B--doshiae ! ! ! ! ! ! ! ! +B-henselae ! ! ! +-12 ! +--9 +B-elizabet ! ! +--4 ! +B-berhoffi ! ! ! +--5 ! ! +--6 +B-arupensi ! ! ! ! ! +B-vinsonii ! ! ! ! +B-spp-Deer ! ! +--1 ! +--3 +B--weissii ! ! ! +B-bacillif ! --2B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00261 4 7 0.00639 7 B-quintana 0.01164 7 9 0.00132 9 11 0.00066 11 10 0.00058 10 B-birtlesi 0.00623 10 8 0.00067 8 B-grahamii 0.00714 8 B--doshiae 0.00376 11 12 0.00052 12 B-henselae 0.00785 12 B-elizabet 0.00815 9 6 0.00287 6 5 0.00167 5 B-berhoffi 0.00306 5 B-arupensi 0.00394 6 B-vinsonii 0.00568 4 3 0.00247 3 1 0.00752 1 B-spp-Deer 0.00683 1 B--weissii 0.00457 3 B-bacillif 0.01033 2 B-clarridg 0.01651 2 A-tumefaci 0.08479 Data set # 38: Neighbor-joining method Negative branch lengths allowed +B-quintana +--5 ! +B-henselae ! +--9 +B-elizabet ! ! +--7 ! ! ! +B-grahamii ! ! ! ! +-12 +B-birtlesi ! ! +-10 ! ! ! +B--doshiae ! +-11 ! ! +B-berhoffi ! ! +--6 ! +--8 +B-arupensi ! ! ! +B-vinsonii ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00510 9 5 0.00199 5 B-quintana 0.01245 5 B-henselae 0.00715 9 12 0.00104 12 7 0.00176 7 B-elizabet 0.00929 7 B-grahamii 0.00541 12 11 0.00022 11 10 0.00048 10 B-birtlesi 0.00996 10 B--doshiae 0.00404 11 8 0.00142 8 6 0.00127 6 B-berhoffi 0.00425 6 B-arupensi 0.00375 8 B-vinsonii 0.00443 4 3 0.00145 3 2 0.00085 2 1 0.00814 1 B-spp-Deer 0.00811 1 B--weissii 0.00509 2 B-bacillif 0.01171 3 B-clarridg 0.01450 4 A-tumefaci 0.09784 Data set # 39: Neighbor-joining method Negative branch lengths allowed +B-vinsonii +--8 ! ! +B-arupensi ! +--5 ! +B-berhoffi ! +-11 +B-quintana ! ! +--6 ! ! ! +B-henselae ! ! +-10 ! ! ! ! +B-elizabet ! ! ! +--7 ! +-12 +B-grahamii +--4 ! ! ! ! +B-birtlesi ! ! +--9 ! ! +B--doshiae ! ! ! ! +B--weissii ! ! +--1 ! +--3 +B-spp-Deer ! ! ! +B-bacillif ! --2B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00299 4 11 0.00677 11 8 0.00118 8 B-vinsonii 0.00476 8 5 0.00214 5 B-arupensi 0.00262 5 B-berhoffi 0.00408 11 12 0.00034 12 10 0.00085 10 6 0.00249 6 B-quintana 0.01148 6 B-henselae 0.00532 10 7 0.00139 7 B-elizabet 0.01014 7 B-grahamii 0.00606 12 9 0.00095 9 B-birtlesi 0.00760 9 B--doshiae 0.00490 4 3 0.00263 3 1 0.00716 1 B--weissii 0.00386 1 B-spp-Deer 0.00584 3 B-bacillif 0.01094 2 B-clarridg 0.01577 2 A-tumefaci 0.08343 Data set # 40: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-elizabet ! +--6 ! +--7 +B-grahamii +--9 ! ! ! ! +-11 +B-birtlesi ! ! ! ! ! ! ! ! +B--doshiae ! ! ! +-12 ! +-10 +B-henselae ! ! ! ! +B-berhoffi ! ! +--5 ! +--8 +B-arupensi ! ! ! +B-vinsonii ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00489 9 B-quintana 0.01330 9 10 0.00107 10 11 0.00081 11 7 0.00195 7 6 0.00164 6 B-elizabet 0.01397 6 B-grahamii 0.00683 7 B-birtlesi 0.00831 11 12 0.00055 12 B--doshiae 0.00426 12 B-henselae 0.00564 10 8 0.00146 8 5 0.00239 5 B-berhoffi 0.00302 5 B-arupensi 0.00368 8 B-vinsonii 0.00461 4 3 0.00080 3 2 0.00304 2 1 0.00735 1 B--weissii 0.00420 1 B-spp-Deer 0.00850 2 B-bacillif 0.01225 3 B-clarridg 0.01596 4 A-tumefaci 0.08953 Data set # 41: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-arupensi ! +--6 ! +-10 +B-berhoffi ! ! ! +--5 ! +B-vinsonii ! ! ! ! ! +-11 +B-grahamii ! ! ! ! +--7 ! ! ! ! +--8 +B-elizabet ! ! ! ! ! ! +--4 +-12 +--9 +B-birtlesi ! ! ! ! ! ! ! +B--doshiae ! ! ! ! ! +B-henselae ! ! ! +B-clarridg ! ! +B--weissii ! +--1 --3--2 +B-spp-Deer ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00071 4 5 0.00634 5 B-quintana 0.01129 5 12 0.00159 12 11 0.00068 11 10 0.00076 10 6 0.00165 6 B-arupensi 0.00281 6 B-berhoffi 0.00539 10 B-vinsonii 0.00535 11 9 0.00114 9 8 0.00056 8 7 0.00117 7 B-grahamii 0.00599 7 B-elizabet 0.01031 8 B-birtlesi 0.00608 9 B--doshiae 0.00422 12 B-henselae 0.00709 4 B-clarridg 0.01343 3 2 0.00032 2 1 0.00802 1 B--weissii 0.00470 1 B-spp-Deer 0.00500 2 B-bacillif 0.00923 3 A-tumefaci 0.09735 Data set # 42: Neighbor-joining method Negative branch lengths allowed +B-arupensi +--7 +--8 +B-berhoffi ! ! +-10 +B-vinsonii ! ! +-11 +B--doshiae ! ! ! ! +B-birtlesi ! +-12 +--9 ! +B-grahamii ! ! +--6 ! ! +B-elizabet ! ! ! ! +B-quintana ! +--5 ! +B-henselae ! ! +B-bacillif ! ! --4--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00391 9 11 0.00094 11 10 0.00041 10 8 0.00177 8 7 0.00075 7 B-arupensi 0.00222 7 B-berhoffi 0.00478 8 B-vinsonii 0.00290 10 B--doshiae 0.00471 11 12 0.00017 12 B-birtlesi 0.00976 12 6 0.00204 6 B-grahamii 0.00656 6 B-elizabet 0.00984 9 5 0.00342 5 B-quintana 0.01180 5 B-henselae 0.00560 4 3 0.00287 3 B-bacillif 0.01235 3 2 0.00110 2 1 0.00777 1 B-spp-Deer 0.00930 1 B--weissii 0.00360 2 B-clarridg 0.01738 4 A-tumefaci 0.09671 Data set # 43: Neighbor-joining method Negative branch lengths allowed +B-birtlesi ! ! +B-berhoffi ! +--5 +--8 ! +B-arupensi ! ! +--9 ! ! ! ! +B--doshiae ! ! ! +--7 ! +-10 +B-grahamii ! ! ! ! +B-elizabet +--4 +-11 ! ! ! +B-vinsonii ! ! +-12 ! ! ! +B-henselae ! ! +--6 ! ! +B-quintana ! ! ! +B-clarridg ! ! +B--weissii ! +--1 --3--2 +B-spp-Deer ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00141 4 8 0.00594 8 B-birtlesi 0.00891 8 10 0.00087 10 9 0.00049 9 5 0.00260 5 B-berhoffi 0.00522 5 B-arupensi 0.00248 9 7 0.00077 7 B--doshiae 0.00506 7 B-grahamii 0.00714 10 11 0.00063 11 B-elizabet 0.00827 11 12 0.00026 12 B-vinsonii 0.00488 12 6 0.00132 6 B-henselae 0.00826 6 B-quintana 0.01204 4 B-clarridg 0.01679 3 2 0.00033 2 1 0.01032 1 B--weissii 0.00269 1 B-spp-Deer 0.00801 2 B-bacillif 0.01018 3 A-tumefaci 0.09455 Data set # 44: Neighbor-joining method Negative branch lengths allowed +B-bacillif +--2 ! ! +B--weissii +--3 +--1 ! ! +B-spp-Deer ! ! ! +B-clarridg ! ! +B-grahamii ! +--7 ! ! +B-elizabet ! +--9 ! ! ! +B-quintana ! ! +--6 ! ! +B-henselae --4-11 ! ! +B-arupensi ! ! +--5 ! ! +--8 +B-berhoffi ! ! ! ! ! +-12 +B-vinsonii ! ! ! ! +B--doshiae ! +-10 ! +B-birtlesi ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00280 3 2 0.00130 2 B-bacillif 0.01099 2 1 0.00881 1 B--weissii 0.00413 1 B-spp-Deer 0.00687 3 B-clarridg 0.01844 4 11 0.00762 11 9 0.00122 9 7 0.00183 7 B-grahamii 0.00657 7 B-elizabet 0.00943 9 6 0.00215 6 B-quintana 0.01351 6 B-henselae 0.00509 11 12 0.00022 12 8 0.00130 8 5 0.00309 5 B-arupensi 0.00385 5 B-berhoffi 0.00435 8 B-vinsonii 0.00556 12 10 0.00063 10 B--doshiae 0.00591 10 B-birtlesi 0.00729 4 A-tumefaci 0.08200 Data set # 45: Neighbor-joining method Negative branch lengths allowed +B-henselae +--6 ! +B-quintana +-10 ! ! +B-vinsonii ! +--7 ! ! +B-berhoffi +-12 +--5 ! ! +B-arupensi ! ! ! ! +B-elizabet +-11 +--9 ! ! ! +B-grahamii ! ! +--8 ! ! +B-birtlesi ! ! ! +B--doshiae ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 11 0.00373 11 12 0.00029 12 10 0.00038 10 6 0.00173 6 B-henselae 0.00631 6 B-quintana 0.01039 10 7 0.00135 7 B-vinsonii 0.00463 7 5 0.00147 5 B-berhoffi 0.00389 5 B-arupensi 0.00301 12 9 0.00089 9 B-elizabet 0.01093 9 8 0.00067 8 B-grahamii 0.00704 8 B-birtlesi 0.00716 11 B--doshiae 0.00494 4 3 0.00142 3 2 0.00217 2 1 0.00820 1 B--weissii 0.00339 1 B-spp-Deer 0.00731 2 B-clarridg 0.01090 3 B-bacillif 0.01101 4 A-tumefaci 0.09029 Data set # 46: Neighbor-joining method Negative branch lengths allowed +B-quintana ! +--7 +B-henselae ! ! ! ! ! ! +B-vinsonii ! +--9 +--6 ! ! ! ! +B-berhoffi ! ! ! +--5 ! ! ! +B-arupensi ! +-10 ! ! +B-birtlesi +--4 ! +-11 ! ! ! ! ! +B-elizabet ! ! +-12 +--8 ! ! ! +B-grahamii ! ! ! ! ! +B--doshiae ! ! ! ! +B--weissii ! ! +--1 ! +--2 +B-spp-Deer ! ! ! +B-bacillif ! --3B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00242 4 7 0.00463 7 B-quintana 0.01152 7 9 0.00129 9 B-henselae 0.00634 9 10 0.00107 10 6 0.00257 6 B-vinsonii 0.00523 6 5 0.00102 5 B-berhoffi 0.00217 5 B-arupensi 0.00253 10 12 0.00083 12 11 0.00060 11 B-birtlesi 0.00741 11 8 0.00134 8 B-elizabet 0.00852 8 B-grahamii 0.00718 12 B--doshiae 0.00605 4 2 0.00279 2 1 0.00841 1 B--weissii 0.00533 1 B-spp-Deer 0.00707 2 B-bacillif 0.01049 3 B-clarridg 0.01777 3 A-tumefaci 0.09233 Data set # 47: Neighbor-joining method Negative branch lengths allowed +B-henselae +--5 ! +B-quintana ! ! +B-vinsonii ! +--9 +-12 ! ! +B-berhoffi ! ! ! +--6 ! ! +-10 +B-arupensi ! ! ! ! ! ! ! ! +B--doshiae ! ! ! +--8 ! +-11 ! +B-birtlesi ! ! +--7 ! ! +B-grahamii ! ! ! +B-elizabet ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 12 0.00527 12 5 0.00265 5 B-henselae 0.00663 5 B-quintana 0.01447 12 11 0.00040 11 10 0.00115 10 9 0.00090 9 B-vinsonii 0.00389 9 6 0.00236 6 B-berhoffi 0.00581 6 B-arupensi 0.00289 10 8 0.00108 8 B--doshiae 0.00517 8 7 0.00163 7 B-birtlesi 0.00767 7 B-grahamii 0.00583 11 B-elizabet 0.01265 4 3 0.00104 3 2 0.00104 2 1 0.00860 1 B--weissii 0.00269 1 B-spp-Deer 0.00921 2 B-clarridg 0.01595 3 B-bacillif 0.01333 4 A-tumefaci 0.09691 Data set # 48: Neighbor-joining method Negative branch lengths allowed +B-elizabet +--6 +--9 +B-grahamii ! ! +-10 +B-birtlesi ! ! ! +B--doshiae +-11 ! ! +B-henselae ! ! +--7 ! ! ! +B-quintana ! +-12 ! ! +B-vinsonii ! +--8 ! ! +B-arupensi ! +--5 ! +B-berhoffi ! ! +B-spp-Deer ! +--1 ! +--2 +B--weissii ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 11 0.00457 11 10 0.00065 10 9 0.00059 9 6 0.00171 6 B-elizabet 0.01068 6 B-grahamii 0.00552 9 B-birtlesi 0.00769 10 B--doshiae 0.00556 11 12 0.00057 12 7 0.00166 7 B-henselae 0.00764 7 B-quintana 0.01216 12 8 0.00171 8 B-vinsonii 0.00409 8 5 0.00126 5 B-arupensi 0.00317 5 B-berhoffi 0.00353 4 3 0.00150 3 2 0.00191 2 1 0.00590 1 B-spp-Deer 0.00862 1 B--weissii 0.00578 2 B-bacillif 0.01315 3 B-clarridg 0.01591 4 A-tumefaci 0.08790 Data set # 49: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-quintana ! +--5 ! ! +B-henselae ! ! ! +--8 +B-vinsonii ! ! ! +--9 ! ! ! ! ! +B-berhoffi ! ! ! ! +--7 ! ! +-11 +B-arupensi ! ! ! ! ! ! +B--doshiae ! ! ! ! --3--4 +-12 +B-elizabet ! ! ! +--6 ! ! +-10 +B-grahamii ! ! ! ! ! +B-birtlesi ! ! ! ! +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.01621 3 4 0.00174 4 8 0.00502 8 5 0.00188 5 B-quintana 0.01239 5 B-henselae 0.00511 8 11 0.00117 11 9 0.00097 9 B-vinsonii 0.00587 9 7 0.00103 7 B-berhoffi 0.00460 7 B-arupensi 0.00260 11 12 0.00035 12 B--doshiae 0.00468 12 10 0.00059 10 6 0.00157 6 B-elizabet 0.00900 6 B-grahamii 0.00720 10 B-birtlesi 0.00743 4 2 0.00340 2 1 0.00624 1 B-spp-Deer 0.00699 1 B--weissii 0.00471 2 B-bacillif 0.00981 3 A-tumefaci 0.09259 Data set # 50: Neighbor-joining method Negative branch lengths allowed +B-quintana +--5 ! +B-henselae ! ! +B-berhoffi +--9 +--7 ! ! +--8 +B-arupensi ! ! ! ! ! ! ! +B-vinsonii ! +-11 ! ! +B--doshiae ! ! +-10 ! ! ! +B-birtlesi ! +-12 ! ! +B-grahamii ! +--6 ! +B-elizabet ! ! +B-clarridg ! +--2 ! ! ! +B--weissii --4--3 +--1 ! ! +B-spp-Deer ! ! ! +B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00450 9 5 0.00321 5 B-quintana 0.00794 5 B-henselae 0.00506 9 11 0.00052 11 8 0.00188 8 7 0.00105 7 B-berhoffi 0.00368 7 B-arupensi 0.00402 8 B-vinsonii 0.00430 11 12 0.00010 12 10 0.00035 10 B--doshiae 0.00464 10 B-birtlesi 0.00736 12 6 0.00302 6 B-grahamii 0.00550 6 B-elizabet 0.00770 4 3 0.00226 3 2 0.00173 2 B-clarridg 0.01373 2 1 0.00802 1 B--weissii 0.00200 1 B-spp-Deer 0.00720 3 B-bacillif 0.00967 4 A-tumefaci 0.08899 Data set # 51: Neighbor-joining method Negative branch lengths allowed +B-quintana +--3 ! +B-henselae ! +--9 +B-vinsonii ! ! +--8 ! ! ! ! +B-arupensi ! ! ! +--6 ! +-10 +B-berhoffi ! ! ! ! +B-birtlesi ! +-11 ! ! +B--doshiae ! +-12 ! ! +B-grahamii ! +--7 ! +B-elizabet ! ! +B-clarridg --5--4 ! ! +B-bacillif ! +--2 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 5 9 0.00430 9 3 0.00462 3 B-quintana 0.01057 3 B-henselae 0.00643 9 10 0.00097 10 8 0.00183 8 B-vinsonii 0.00414 8 6 0.00221 6 B-arupensi 0.00367 6 B-berhoffi 0.00383 10 11 0.00091 11 B-birtlesi 0.00629 11 12 0.00043 12 B--doshiae 0.00451 12 7 0.00204 7 B-grahamii 0.00588 7 B-elizabet 0.00932 5 4 0.00048 4 B-clarridg 0.01589 4 2 0.00186 2 B-bacillif 0.01058 2 1 0.00742 1 B-spp-Deer 0.01121 1 B--weissii 0.00399 5 A-tumefaci 0.09083 Data set # 52: Neighbor-joining method Negative branch lengths allowed +B-spp-Deer +--1 +--2 +B--weissii ! ! +--3 +B-bacillif ! ! ! +B-clarridg ! ! +B-quintana ! ! ! ! +B-elizabet ! ! +--8 --4--6 ! +B-grahamii ! ! +-11 ! ! ! ! +B--doshiae ! ! ! ! +--9 ! ! ! +-10 +B-birtlesi ! +-12 ! ! ! +B-henselae ! ! ! ! +B-vinsonii ! +--7 ! ! +B-berhoffi ! +--5 ! +B-arupensi ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00138 3 2 0.00195 2 1 0.00929 1 B-spp-Deer 0.00715 1 B--weissii 0.00325 2 B-bacillif 0.01121 3 B-clarridg 0.01497 4 6 0.00469 6 B-quintana 0.01062 6 12 0.00236 12 11 0.00047 11 8 0.00112 8 B-elizabet 0.00976 8 B-grahamii 0.00674 11 10 0.00073 10 9 0.00080 9 B--doshiae 0.00367 9 B-birtlesi 0.00953 10 B-henselae 0.00690 12 7 0.00135 7 B-vinsonii 0.00510 7 5 0.00250 5 B-berhoffi 0.00297 5 B-arupensi 0.00273 4 A-tumefaci 0.09595 Data set # 53: Neighbor-joining method Negative branch lengths allowed +B-birtlesi ! ! +B-grahamii +--8 +--9 ! ! ! +B--doshiae ! ! ! ! ! ! +B-berhoffi ! +-10 +--5 ! ! +--6 +B-arupensi ! ! ! ! ! ! ! +B-vinsonii ! +-11 ! ! +B-quintana ! ! +--7 ! +-12 +B-henselae ! ! ! +B-elizabet ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 8 0.00757 8 B-birtlesi 0.00830 8 10 0.00093 10 9 0.00038 9 B-grahamii 0.00714 9 B--doshiae 0.00586 10 11 0.00071 11 6 0.00283 6 5 0.00244 5 B-berhoffi 0.00395 5 B-arupensi 0.00225 6 B-vinsonii 0.00461 11 12 0.00019 12 7 0.00169 7 B-quintana 0.01242 7 B-henselae 0.00688 12 B-elizabet 0.01206 4 3 0.00128 3 2 0.00055 2 1 0.00660 1 B--weissii 0.00412 1 B-spp-Deer 0.00738 2 B-clarridg 0.01235 3 B-bacillif 0.01125 4 A-tumefaci 0.08564 Data set # 54: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-elizabet ! +--6 +--7 ! +B-grahamii ! ! +-12 ! ! ! ! +B-berhoffi ! ! ! ! +--5 ! ! ! +--8 +B-arupensi ! +-11 ! ! ! +B-vinsonii ! ! ! ! +B-henselae ! +-10 ! ! +B-birtlesi ! +--9 ! +B--doshiae ! ! +B-clarridg ! ! --4--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 7 0.00483 7 B-quintana 0.00917 7 11 0.00160 11 12 0.00037 12 6 0.00175 6 B-elizabet 0.01006 6 B-grahamii 0.00414 12 8 0.00111 8 5 0.00155 5 B-berhoffi 0.00478 5 B-arupensi 0.00242 8 B-vinsonii 0.00445 11 10 0.00063 10 B-henselae 0.00732 10 9 0.00043 9 B-birtlesi 0.00708 9 B--doshiae 0.00362 4 3 0.00110 3 B-clarridg 0.01450 3 2 0.00135 2 1 0.00593 1 B-spp-Deer 0.00615 1 B--weissii 0.00325 2 B-bacillif 0.01262 4 A-tumefaci 0.09269 Data set # 55: Neighbor-joining method Negative branch lengths allowed +B-berhoffi +--5 +--6 +B-arupensi ! ! ! +B-vinsonii +--9 ! ! +B-henselae ! ! ! ! +-11 +B-elizabet ! ! +--8 +--7 ! ! +B-grahamii ! ! +-12 ! ! ! +B-birtlesi ! ! +-10 ! ! +B--doshiae ! ! ! +B-quintana ! ! +B-bacillif ! +--2 ! ! ! +B--weissii --4--3 +--1 ! ! +B-spp-Deer ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 7 0.00320 7 9 0.00212 9 6 0.00198 6 5 0.00156 5 B-berhoffi 0.00308 5 B-arupensi 0.00432 6 B-vinsonii 0.00354 9 11 0.00135 11 B-henselae 0.00720 11 12 0.00062 12 8 0.00175 8 B-elizabet 0.00950 8 B-grahamii 0.00520 12 10 0.00085 10 B-birtlesi 0.00667 10 B--doshiae 0.00403 7 B-quintana 0.01081 4 3 0.00198 3 2 0.00299 2 B-bacillif 0.00858 2 1 0.00757 1 B--weissii 0.00354 1 B-spp-Deer 0.00636 3 B-clarridg 0.01331 4 A-tumefaci 0.09235 Data set # 56: Neighbor-joining method Negative branch lengths allowed +B-quintana ! +--6 +B-henselae ! ! ! ! ! ! +B-berhoffi ! +-10 +--5 ! ! +--9 +B-arupensi ! ! ! ! ! ! ! +B-vinsonii ! +-11 ! ! +B--doshiae ! ! ! ! +-12 +B-grahamii ! ! +--7 ! +--8 +B-birtlesi ! ! ! +B-elizabet ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-clarridg ! ! ! +B-bacillif ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 6 0.00603 6 B-quintana 0.01345 6 10 0.00167 10 B-henselae 0.00567 10 11 0.00038 11 9 0.00098 9 5 0.00187 5 B-berhoffi 0.00368 5 B-arupensi 0.00182 9 B-vinsonii 0.00443 11 12 0.00022 12 B--doshiae 0.00418 12 8 0.00110 8 7 0.00083 7 B-grahamii 0.00581 7 B-birtlesi 0.00589 8 B-elizabet 0.00827 4 3 0.00178 3 2 0.00069 2 1 0.00747 1 B--weissii 0.00359 1 B-spp-Deer 0.00781 2 B-clarridg 0.01613 3 B-bacillif 0.01254 4 A-tumefaci 0.09235 Data set # 57: Neighbor-joining method Negative branch lengths allowed +B-quintana ! ! +B-vinsonii ! +--6 ! ! ! +B-arupensi ! ! +--5 +--7 +-11 +B-berhoffi ! ! ! ! ! ! ! ! +B--doshiae ! ! +-12 +-10 ! ! ! ! +B-birtlesi ! ! ! ! +--4 +--8 ! +B-grahamii ! ! ! +--9 ! ! ! +B-elizabet ! ! ! ! ! +B-henselae ! ! ! ! +B-bacillif ! +--2 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! --3B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00130 4 7 0.00729 7 B-quintana 0.01106 7 8 0.00107 8 12 0.00087 12 11 0.00022 11 6 0.00201 6 B-vinsonii 0.00468 6 5 0.00142 5 B-arupensi 0.00314 5 B-berhoffi 0.00306 11 10 0.00039 10 B--doshiae 0.00466 10 B-birtlesi 0.00834 12 9 0.00078 9 B-grahamii 0.00858 9 B-elizabet 0.00792 8 B-henselae 0.00600 4 2 0.00259 2 B-bacillif 0.01121 2 1 0.00949 1 B-spp-Deer 0.01037 1 B--weissii 0.00363 3 B-clarridg 0.01653 3 A-tumefaci 0.08537 Data set # 58: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-bacillif ! +--3 ! ! ! +B-spp-Deer ! ! +--1 ! ! +B--weissii ! ! --2--4 +B-quintana ! ! +--5 ! ! ! +B-henselae ! ! ! ! ! ! +B-birtlesi ! +--9 ! ! ! +-11 +B--doshiae ! ! ! ! +--6 ! ! ! +--8 +B-grahamii ! ! ! ! ! +-12 +B-elizabet ! ! ! ! +B-berhoffi ! ! +--7 ! +-10 +B-arupensi ! ! ! +B-vinsonii ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 B-clarridg 0.01560 2 4 0.00320 4 3 0.00165 3 B-bacillif 0.01407 3 1 0.00938 1 B-spp-Deer 0.00765 1 B--weissii 0.00555 4 9 0.00530 9 5 0.00143 5 B-quintana 0.00912 5 B-henselae 0.00608 9 12 0.00107 12 11 0.00028 11 B-birtlesi 0.00873 11 8 0.00115 8 6 0.00115 6 B--doshiae 0.00383 6 B-grahamii 0.00637 8 B-elizabet 0.00940 12 10 0.00087 10 7 0.00107 7 B-berhoffi 0.00523 7 B-arupensi 0.00477 10 B-vinsonii 0.00323 2 A-tumefaci 0.08380 Data set # 59: Neighbor-joining method Negative branch lengths allowed +B-bacillif ! ! +B-berhoffi ! +--5 ! +--7 +B-arupensi ! ! ! ! +-12 +B-vinsonii ! ! ! ! ! +B-elizabet ! +-11 ! ! ! +B-birtlesi ! ! ! +--8 ! ! +--9 +B--doshiae ! +-10 ! ! ! ! +B-grahamii ! ! ! ! ! ! +B-quintana --3--4 +--6 ! ! +B-henselae ! ! ! ! +B-clarridg ! +--2 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-bacillif 0.01081 3 4 0.00138 4 10 0.00703 10 11 0.00085 11 12 0.00075 12 7 0.00156 7 5 0.00191 5 B-berhoffi 0.00449 5 B-arupensi 0.00321 7 B-vinsonii 0.00489 12 B-elizabet 0.00889 11 9 0.00102 9 8 0.00052 8 B-birtlesi 0.00634 8 B--doshiae 0.00436 9 B-grahamii 0.00723 10 6 0.00139 6 B-quintana 0.01176 6 B-henselae 0.00684 4 2 0.00178 2 B-clarridg 0.01580 2 1 0.00935 1 B-spp-Deer 0.00798 1 B--weissii 0.00422 3 A-tumefaci 0.08629 Data set # 60: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! +--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-bacillif ! ! +B-quintana ! ! ! ! +B-henselae --4--6 ! ! ! ! +B-elizabet ! ! ! +--9 ! +-10 ! +B-grahamii ! ! +-12 ! ! ! ! +B-birtlesi ! ! ! +--8 ! +-11 +B--doshiae ! ! ! ! +B-vinsonii ! +--7 ! ! +B-arupensi ! +--5 ! +B-berhoffi ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00090 3 B-clarridg 0.01498 3 2 0.00199 2 1 0.00810 1 B-spp-Deer 0.00773 1 B--weissii 0.00317 2 B-bacillif 0.01065 4 6 0.00501 6 B-quintana 0.01351 6 10 0.00166 10 B-henselae 0.00730 10 11 0.00080 11 12 0.00020 12 9 0.00094 9 B-elizabet 0.00812 9 B-grahamii 0.00478 12 8 0.00136 8 B-birtlesi 0.00790 8 B--doshiae 0.00400 11 7 0.00173 7 B-vinsonii 0.00397 7 5 0.00213 5 B-arupensi 0.00308 5 B-berhoffi 0.00392 4 A-tumefaci 0.09977 Data set # 61: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-quintana ! ! ! ! +B-henselae ! ! ! ! +--7 +-10 +B-elizabet ! ! ! ! ! +--9 ! ! ! ! ! ! +B-grahamii ! ! ! ! +-11 ! ! ! ! ! +B--doshiae ! ! +--8 +-12 ! ! ! +B-birtlesi --2--4 ! ! ! ! +B-vinsonii ! ! ! +--5 ! ! +--6 +B-arupensi ! ! ! ! ! +B-berhoffi ! ! ! ! +B-bacillif ! +--3 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 B-clarridg 0.01584 2 4 0.00279 4 7 0.00464 7 B-quintana 0.01456 7 8 0.00106 8 10 0.00199 10 B-henselae 0.00676 10 11 0.00057 11 9 0.00170 9 B-elizabet 0.00934 9 B-grahamii 0.00786 11 12 0.00053 12 B--doshiae 0.00293 12 B-birtlesi 0.00927 8 6 0.00225 6 5 0.00052 5 B-vinsonii 0.00348 5 B-arupensi 0.00242 6 B-berhoffi 0.00438 4 3 0.00106 3 B-bacillif 0.01145 3 1 0.00750 1 B-spp-Deer 0.00908 1 B--weissii 0.00462 2 A-tumefaci 0.09406 Data set # 62: Neighbor-joining method Negative branch lengths allowed +B-henselae +--5 +--7 +B-quintana ! ! +--9 +B-vinsonii ! ! ! ! +B-berhoffi ! +--6 +-10 +B-arupensi ! ! ! ! +B-birtlesi ! ! +-12 ! ! ! +B--doshiae ! +-11 ! ! +B-elizabet ! +--8 ! +B-grahamii ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 10 0.00649 10 9 0.00055 9 7 0.00106 7 5 0.00172 5 B-henselae 0.00688 5 B-quintana 0.01032 7 B-vinsonii 0.00503 9 6 0.00243 6 B-berhoffi 0.00478 6 B-arupensi 0.00342 10 11 0.00066 11 12 0.00027 12 B-birtlesi 0.00744 12 B--doshiae 0.00406 11 8 0.00103 8 B-elizabet 0.01017 8 B-grahamii 0.00783 4 3 0.00177 3 2 0.00102 2 1 0.00960 1 B--weissii 0.00385 1 B-spp-Deer 0.00735 2 B-bacillif 0.01085 3 B-clarridg 0.01373 4 A-tumefaci 0.09043 Data set # 63: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-bacillif ! +--3 ! ! ! +B--weissii ! ! +--1 ! ! +B-spp-Deer --2--4 ! ! +B-quintana ! ! ! ! ! ! +B-henselae ! +--6 ! ! ! ! +B-grahamii ! ! ! +--7 ! +--8 +-11 +B-elizabet ! ! ! ! ! ! +-12 +B--doshiae ! ! ! ! ! ! ! +B-birtlesi ! +-10 ! ! +B-arupensi ! ! +--5 ! +--9 +B-berhoffi ! ! ! +B-vinsonii ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 B-clarridg 0.01895 2 4 0.00292 4 3 0.00140 3 B-bacillif 0.01249 3 1 0.00756 1 B--weissii 0.00591 1 B-spp-Deer 0.00729 4 6 0.00586 6 B-quintana 0.01113 6 8 0.00165 8 B-henselae 0.00914 8 10 0.00085 10 12 0.00073 12 11 0.00057 11 7 0.00068 7 B-grahamii 0.00727 7 B-elizabet 0.01203 11 B--doshiae 0.00467 12 B-birtlesi 0.00806 10 9 0.00079 9 5 0.00204 5 B-arupensi 0.00201 5 B-berhoffi 0.00319 9 B-vinsonii 0.00661 2 A-tumefaci 0.09685 Data set # 64: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-spp-Deer ! +--1 ! +--3 +B--weissii ! ! ! ! ! +B-bacillif --2--4 ! ! +B-quintana ! ! ! ! +--6 +B-henselae ! ! ! ! ! ! +B-vinsonii ! +-10 +--9 ! ! ! ! +B-arupensi ! ! ! +--5 ! ! ! +B-berhoffi ! +-11 ! ! +B-elizabet ! ! +--8 ! ! ! +B-grahamii ! +-12 ! ! +B-birtlesi ! +--7 ! +B--doshiae ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 B-clarridg 0.01821 2 4 0.00219 4 3 0.00218 3 1 0.00898 1 B-spp-Deer 0.00665 1 B--weissii 0.00485 3 B-bacillif 0.01022 4 6 0.00567 6 B-quintana 0.01270 6 10 0.00161 10 B-henselae 0.00697 10 11 0.00097 11 9 0.00107 9 B-vinsonii 0.00314 9 5 0.00261 5 B-arupensi 0.00407 5 B-berhoffi 0.00463 11 12 0.00013 12 8 0.00106 8 B-elizabet 0.00806 8 B-grahamii 0.00564 12 7 0.00109 7 B-birtlesi 0.00656 7 B--doshiae 0.00394 2 A-tumefaci 0.08649 Data set # 65: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-henselae ! ! ! ! +B-vinsonii ! +--7 +--8 ! ! ! ! ! +B-arupensi ! ! ! ! +--5 ! ! +-11 +B-berhoffi ! ! ! ! ! ! +B-elizabet ! +--6 ! ! ! ! ! +-12 +B--doshiae ! ! ! ! +--9 ! ! ! +-10 +B-birtlesi ! ! ! ! --3--4 ! +B-grahamii ! ! ! ! ! +B-quintana ! ! ! ! +B-bacillif ! +--2 ! ! +B--weissii ! +--1 ! +B-spp-Deer ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 B-clarridg 0.02123 3 4 0.00162 4 6 0.00586 6 7 0.00143 7 B-henselae 0.00725 7 11 0.00191 11 8 0.00142 8 B-vinsonii 0.00498 8 5 0.00227 5 B-arupensi 0.00409 5 B-berhoffi 0.00311 11 12 0.00008 12 B-elizabet 0.00981 12 10 0.00111 10 9 0.00092 9 B--doshiae 0.00361 9 B-birtlesi 0.00729 10 B-grahamii 0.00558 6 B-quintana 0.01347 4 2 0.00414 2 B-bacillif 0.01237 2 1 0.00838 1 B--weissii 0.00444 1 B-spp-Deer 0.00876 3 A-tumefaci 0.08677 Data set # 66: Neighbor-joining method Negative branch lengths allowed +B-bacillif +--2 ! ! +B--weissii ! +--1 ! +B-spp-Deer ! ! +B-vinsonii ! +--8 +--4 ! ! +B-arupensi ! ! ! +--5 ! ! ! +B-berhoffi ! ! +-10 ! ! ! ! +B-grahamii ! ! ! ! +--7 ! ! ! ! ! +B-elizabet ! ! ! +-11 ! +--9 ! +B-birtlesi ! ! +-12 ! ! +B--doshiae ! ! ! ! +B-quintana ! +--6 ! +B-henselae ! --3B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00104 4 2 0.00210 2 B-bacillif 0.01275 2 1 0.00930 1 B--weissii 0.00481 1 B-spp-Deer 0.00639 4 9 0.00534 9 10 0.00095 10 8 0.00155 8 B-vinsonii 0.00493 8 5 0.00157 5 B-arupensi 0.00391 5 B-berhoffi 0.00329 10 11 0.00068 11 7 0.00177 7 B-grahamii 0.00747 7 B-elizabet 0.01363 11 12 0.00043 12 B-birtlesi 0.00696 12 B--doshiae 0.00654 9 6 0.00155 6 B-quintana 0.00983 6 B-henselae 0.00737 3 B-clarridg 0.01437 3 A-tumefaci 0.09073 Data set # 67: Neighbor-joining method Negative branch lengths allowed +B-bacillif +--2 ! ! +B-spp-Deer +--3 +--1 ! ! +B--weissii ! ! ! +B-clarridg ! ! +B-vinsonii ! +--7 ! ! ! +B-berhoffi ! ! +--5 ! +-10 +B-arupensi ! ! ! ! ! ! +B-quintana ! ! +--6 ! +-11 +B-henselae ! ! ! ! ! ! +B-birtlesi ! ! ! +--8 --4-12 +--9 +B-grahamii ! ! ! ! ! +B-elizabet ! ! ! +B--doshiae ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00146 3 2 0.00195 2 B-bacillif 0.01048 2 1 0.00702 1 B-spp-Deer 0.00717 1 B--weissii 0.00353 3 B-clarridg 0.01773 4 12 0.00746 12 11 0.00047 11 10 0.00049 10 7 0.00125 7 B-vinsonii 0.00394 7 5 0.00181 5 B-berhoffi 0.00410 5 B-arupensi 0.00390 10 6 0.00162 6 B-quintana 0.00609 6 B-henselae 0.00591 11 9 0.00070 9 8 0.00054 8 B-birtlesi 0.00704 8 B-grahamii 0.00566 9 B-elizabet 0.01096 12 B--doshiae 0.00500 4 A-tumefaci 0.08731 Data set # 68: Neighbor-joining method Negative branch lengths allowed +B--doshiae ! ! +B-birtlesi +--9 ! ! ! ! +B-berhoffi ! ! ! +--6 ! +-12 +--7 +B-arupensi ! ! ! ! ! ! +-10 +B-vinsonii ! ! ! ! ! ! ! ! +B-henselae +--4 +-11 +--5 ! ! ! +B-quintana ! ! ! ! ! ! +B-grahamii ! ! +--8 ! ! +B-elizabet ! ! ! ! +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-bacillif ! --3B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 3 4 0.00118 4 9 0.00807 9 B--doshiae 0.00573 9 12 0.00038 12 B-birtlesi 0.00962 12 11 0.00028 11 10 0.00028 10 7 0.00196 7 6 0.00146 6 B-berhoffi 0.00332 6 B-arupensi 0.00218 7 B-vinsonii 0.00464 10 5 0.00316 5 B-henselae 0.00574 5 B-quintana 0.00876 11 8 0.00178 8 B-grahamii 0.00673 8 B-elizabet 0.01287 4 2 0.00263 2 1 0.00735 1 B-spp-Deer 0.00652 1 B--weissii 0.00468 2 B-bacillif 0.01295 3 B-clarridg 0.01693 3 A-tumefaci 0.09747 Data set # 69: Neighbor-joining method Negative branch lengths allowed +B-elizabet ! ! +B-henselae +--9 +--7 ! ! ! +B-quintana ! ! ! ! ! ! +B-vinsonii ! +-10 +--6 ! ! ! ! +B-berhoffi ! ! +-11 +--5 ! ! ! ! +B-arupensi ! ! ! ! ! +-12 +B-birtlesi ! ! ! ! +B--doshiae ! +--8 ! +B-grahamii ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00609 9 B-elizabet 0.01208 9 10 0.00041 10 7 0.00166 7 B-henselae 0.00567 7 B-quintana 0.01013 10 12 0.00055 12 11 0.00045 11 6 0.00182 6 B-vinsonii 0.00395 6 5 0.00155 5 B-berhoffi 0.00259 5 B-arupensi 0.00311 11 B-birtlesi 0.00513 12 8 0.00124 8 B--doshiae 0.00424 8 B-grahamii 0.00476 4 3 0.00053 3 2 0.00306 2 1 0.00590 1 B--weissii 0.00241 1 B-spp-Deer 0.00799 2 B-bacillif 0.01045 3 B-clarridg 0.01341 4 A-tumefaci 0.09107 Data set # 70: Neighbor-joining method Negative branch lengths allowed +B-quintana +--5 ! +B-henselae ! +--9 +B-elizabet ! ! +--7 ! ! ! +B-grahamii ! ! ! ! +-12 +B-birtlesi ! ! +-10 ! ! ! +B--doshiae ! +-11 ! ! +B-arupensi ! ! +--6 ! +--8 +B-berhoffi ! ! ! +B-vinsonii ! ! +B--weissii ! +--1 ! +--2 +B-spp-Deer ! ! ! --4--3 +B-bacillif ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 9 0.00635 9 5 0.00226 5 B-quintana 0.00968 5 B-henselae 0.00712 9 12 0.00086 12 7 0.00181 7 B-elizabet 0.00907 7 B-grahamii 0.00743 12 11 0.00045 11 10 0.00055 10 B-birtlesi 0.00706 10 B--doshiae 0.00414 11 8 0.00123 8 6 0.00132 6 B-arupensi 0.00267 6 B-berhoffi 0.00483 8 B-vinsonii 0.00313 4 3 0.00200 3 2 0.00077 2 1 0.00889 1 B--weissii 0.00392 1 B-spp-Deer 0.00928 2 B-bacillif 0.01036 3 B-clarridg 0.01630 4 A-tumefaci 0.09457 Data set # 71: Neighbor-joining method Negative branch lengths allowed +B-henselae ! ! +B-arupensi +--9 +--5 ! ! +--8 +B-berhoffi ! ! ! ! ! ! ! +B-vinsonii ! +-10 ! ! +B-elizabet +--7 ! +--6 ! ! ! ! +B-grahamii ! ! +-11 ! ! ! +B-birtlesi ! ! +-12 ! ! +B--doshiae ! ! ! +B-quintana ! ! +B-bacillif ! +--2 ! ! ! +B-spp-Deer --4--3 +--1 ! ! +B--weissii ! ! ! +B-clarridg ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 7 0.00538 7 9 0.00140 9 B-henselae 0.00720 9 10 0.00066 10 8 0.00134 8 5 0.00181 5 B-arupensi 0.00438 5 B-berhoffi 0.00332 8 B-vinsonii 0.00469 10 11 0.00033 11 6 0.00208 6 B-elizabet 0.00888 6 B-grahamii 0.00682 11 12 0.00022 12 B-birtlesi 0.00986 12 B--doshiae 0.00434 7 B-quintana 0.01210 4 3 0.00172 3 2 0.00165 2 B-bacillif 0.01279 2 1 0.00931 1 B-spp-Deer 0.00586 1 B--weissii 0.00434 3 B-clarridg 0.01330 4 A-tumefaci 0.09402 Data set # 72: Neighbor-joining method Negative branch lengths allowed +B-bacillif ! +--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-clarridg ! ! +B-quintana ! ! ! ! +B-arupensi --4--8 +--5 ! ! +--7 +B-berhoffi ! ! ! ! ! ! ! +B-vinsonii ! +--9 ! ! +B--doshiae ! ! +-10 ! ! ! +B-henselae ! +-11 ! ! +B-elizabet ! ! +--6 ! +-12 +B-grahamii ! ! ! +B-birtlesi ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00049 3 B-bacillif 0.00879 3 2 0.00243 2 1 0.00644 1 B-spp-Deer 0.00733 1 B--weissii 0.00207 2 B-clarridg 0.01326 4 8 0.00584 8 B-quintana 0.01201 8 9 0.00069 9 7 0.00152 7 5 0.00145 5 B-arupensi 0.00291 5 B-berhoffi 0.00279 7 B-vinsonii 0.00380 9 11 0.00079 11 10 0.00076 10 B--doshiae 0.00426 10 B-henselae 0.00624 11 12 0.00042 12 6 0.00155 6 B-elizabet 0.00921 6 B-grahamii 0.00709 12 B-birtlesi 0.00570 4 A-tumefaci 0.09554 Data set # 73: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! ! +B-quintana ! ! ! ! +B-berhoffi ! ! +--6 ! ! +--7 +B-arupensi ! +--5 ! ! ! ! ! +-11 +B-vinsonii ! ! ! ! ! ! ! ! ! ! +B-birtlesi ! ! ! ! +-12 ! ! ! ! ! +B--doshiae ! ! +--8 +-10 --2--4 ! ! +B-grahamii ! ! ! +--9 ! ! ! +B-elizabet ! ! ! ! ! +B-henselae ! ! ! ! +B-bacillif ! +--3 ! ! +B-spp-Deer ! +--1 ! +B--weissii ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 B-clarridg 0.01250 2 4 0.00264 4 5 0.00299 5 B-quintana 0.01042 5 8 0.00211 8 11 0.00133 11 7 0.00175 7 6 0.00053 6 B-berhoffi 0.00415 6 B-arupensi 0.00305 7 B-vinsonii 0.00772 11 12 0.00025 12 B-birtlesi 0.00964 12 10 0.00028 10 B--doshiae 0.00522 10 9 0.00118 9 B-grahamii 0.00844 9 B-elizabet 0.01006 8 B-henselae 0.00778 4 3 0.00103 3 B-bacillif 0.01301 3 1 0.00869 1 B-spp-Deer 0.00655 1 B--weissii 0.00315 2 A-tumefaci 0.09040 Data set # 74: Neighbor-joining method Negative branch lengths allowed +B-clarridg ! +--3 +B-spp-Deer ! ! +--1 ! +--2 +B--weissii ! ! ! +B-bacillif ! ! +B-quintana ! +--5 ! ! +B-henselae ! ! ! ! +B-birtlesi ! ! +--9 --4--7 ! ! +B-grahamii ! ! ! +--8 ! ! +-11 +B-elizabet ! ! ! ! ! ! ! ! +B-arupensi ! ! ! ! +--6 ! +-12 +-10 +B-berhoffi ! ! ! ! ! +B-vinsonii ! ! ! +B--doshiae ! +-----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 4 3 0.00232 3 B-clarridg 0.01334 3 2 0.00094 2 1 0.00836 1 B-spp-Deer 0.00715 1 B--weissii 0.00355 2 B-bacillif 0.01054 4 7 0.00567 7 5 0.00199 5 B-quintana 0.01140 5 B-henselae 0.00840 7 12 0.00134 12 11 0.00007 11 9 0.00061 9 B-birtlesi 0.00612 9 8 0.00098 8 B-grahamii 0.00769 8 B-elizabet 0.00881 11 10 0.00037 10 6 0.00186 6 B-arupensi 0.00247 6 B-berhoffi 0.00353 10 B-vinsonii 0.00449 12 B--doshiae 0.00552 4 A-tumefaci 0.09266 Data set # 75: Neighbor-joining method Negative branch lengths allowed +B-spp-Deer +--1 +--3 +B--weissii ! ! ! +B-bacillif +--4 ! ! +B-quintana ! ! ! ! +--5 +B-henselae ! ! ! ! ! ! +B-arupensi ! +--8 +--6 ! ! +--7 +B-berhoffi ! ! ! ! ! ! ! +B-vinsonii ! +-11 ! ! +B-elizabet ! ! +--9 ! ! ! +B-grahamii ! +-12 ! ! +B-birtlesi ! +-10 ! +B--doshiae ! --2B-clarridg ! +----A-tumefaci remember: (although rooted by outgroup) this is an unrooted tree! Between And Length ------- --- ------ 2 4 0.00326 4 3 0.00143 3 1 0.00910 1 B-spp-Deer 0.00835 1 B--weissii 0.00535 3 B-bacillif 0.01215 4 5 0.00396 5 B-quintana 0.01086 5 8 0.00285 8 B-henselae 0.01075 8 11 0.00097 11 7 0.00194 7 6 0.00180 6 B-arupensi 0.00350 6 B-berhoffi 0.00520