Penny algorithm for DNA, version 3.573c branch-and-bound to find all most parsimonious trees requires a total of 221.000 3 trees in all found +--------------------------------------A-tumefaci ! ! +-----------------------B-quintana ! ! ! ! +--------------------B-arupensi ! +--------2 ! ! ! ! ! +--B-grahamii ! ! ! ! +-------11 ! ! ! ! ! +--B-birtlesi --1 ! +--8 +-10 ! ! ! ! ! +-----B--doshiae ! ! ! ! +----13 ! ! ! +--9 ! +--B-vinsonii ! +--3 ! ! ! +-12 ! ! ! ! ! ! +--B-henselae ! ! ! +--6 ! ! ! ! ! +--------------B-elizabet ! ! ! ! ! ! ! +-----------------B-berhoffi +--4 ! ! ! +--B--weissii ! ! +--7 ! +--------------------------5 +--B-spp-Deer ! ! ! +-----B-bacillif ! +-----------------------------------B-clarridg remember: (although rooted by outgroup) this is an unrooted tree! +--------------------------------------A-tumefaci ! ! +-----------------------B-quintana ! ! ! ! +-----------------B-arupensi ! ! ! ! ! ! +--B-grahamii ! +--------2 ! +-------11 ! ! ! +--8 ! +--B-birtlesi ! ! ! ! ! +-10 --1 ! ! ! ! ! ! +-----B--doshiae ! ! ! ! ! ! +----13 ! ! ! ! +--9 ! +--B-vinsonii ! ! +--6 ! +-12 ! +--3 ! ! +--B-henselae ! ! ! ! ! ! ! ! ! +--------------B-elizabet ! ! ! ! ! ! ! +--------------------B-berhoffi ! ! ! +--4 ! +--B--weissii ! ! +--7 ! +--------------------------5 +--B-spp-Deer ! ! ! +-----B-bacillif ! +-----------------------------------B-clarridg remember: (although rooted by outgroup) this is an unrooted tree! +--------------------------------------A-tumefaci ! ! +-----------------------B-quintana ! ! ! ! +--B-grahamii ! ! +-------11 ! ! ! +--B-birtlesi ! +--------2 +-10 ! ! ! ! ! +-----B--doshiae ! ! ! ! +----13 --1 ! ! +-----9 ! +--B-vinsonii ! ! ! ! ! +-12 ! ! ! ! ! +--B-henselae ! ! +--6 ! ! +--3 ! +--------------B-elizabet ! ! ! ! ! ! ! ! +--B-arupensi ! ! ! +-----------------8 ! ! ! +--B-berhoffi ! ! ! +--4 ! +--B--weissii ! ! +--7 ! +--------------------------5 +--B-spp-Deer ! ! ! +-----B-bacillif ! +-----------------------------------B-clarridg remember: (although rooted by outgroup) this is an unrooted tree!